RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CD151P48509 253 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 CDH17Q12864 832 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 DDX39BQ13838 428 aaKnown RBP13.46□□□□□ -0.25
TNC-212ENST00000542877 ZNF467Q7Z7K2 595 aaPredicted RBP13.46□□□□□ -0.25
TNC-212ENST00000542877 ERO1BQ86YB8 467 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 ZDHHC17Q8IUH5 632 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 CCDC33Q8N5R6 958 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 RAET1EQ8TD07 263 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 MAGED4Q96JG8 741 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 BDH2Q9BUT1 245 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 NRDE2Q9H7Z3 1164 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 CLCN3P51790 818 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 OXCT1P55809 520 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 PSMC6P62333 389 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 FAM98BQ52LJ0 330 aaKnown RBP13.46□□□□□ -0.25
TNC-212ENST00000542877 SPANXN3Q5MJ09 141 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 ARHGAP17Q68EM7 881 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 CYP4Z1Q86W10 505 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 KRT84Q9NSB2 600 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 ANKRD6Q9Y2G4 727 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 TCRBV5S4A2TA0A5A2 114 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 TRIM24O15164 1050 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 PLA2G6O60733 806 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 LHX1P48742 406 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 NR2C2P49116 596 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 CCT8P50990 548 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 PACS2Q86VP3 889 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 DHFR2Q86XF0 187 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 DNAAF5Q86Y56 855 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 FUKQ8N0W3 1084 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 ZCCHC9Q8N567 271 aaKnown RBP13.46□□□□□ -0.25
TNC-212ENST00000542877 FAM120BQ96EK7 910 aaKnown RBP13.46□□□□□ -0.25
TNC-212ENST00000542877 CPNE1Q99829 537 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 SCUBE2Q9NQ36 999 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 ITGA11Q9UKX5 1188 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 KBTBD13C9JR72 458 aa13.46□□□□□ -0.26
TNC-212ENST00000542877 ASS1P00966 412 aaKnown RBP13.46□□□□□ -0.26
TNC-212ENST00000542877 PSMA3P25788 255 aa13.46□□□□□ -0.26
TNC-212ENST00000542877 CHI3L1P36222 383 aaPredicted RBP13.46□□□□□ -0.26
TNC-212ENST00000542877 ST3GAL1Q11201 340 aa13.46□□□□□ -0.26
TNC-212ENST00000542877 NCF4Q15080 339 aa13.46□□□□□ -0.26
TNC-212ENST00000542877 ARHGEF19Q8IW93 802 aa13.46□□□□□ -0.26
TNC-212ENST00000542877 SPIRE2Q8WWL2 714 aa13.46□□□□□ -0.26
TNC-212ENST00000542877 CATSPER2Q96P56 530 aa13.46□□□□□ -0.26
TNC-212ENST00000542877 UBXN6Q9BZV1 441 aa13.46□□□□□ -0.26
TNC-212ENST00000542877 PXMP2Q9NR77 195 aa13.46□□□□□ -0.26
TNC-212ENST00000542877 RABGEF1Q9UJ41 708 aa13.46□□□□□ -0.26
TNC-212ENST00000542877 MROH7Q68CQ1 1323 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 PDZK1P1A8MUH7 402 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 TRDMT1O14717 391 aaKnown RBP13.45□□□□□ -0.26
TNC-212ENST00000542877 CYP2B6P20813 491 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 CRABP2P29373 138 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 SKIV2L2P42285 1042 aaKnown RBP13.45□□□□□ -0.26
TNC-212ENST00000542877 NPY2RP49146 381 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 TRAF2Q12933 501 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 COLEC11Q9BWP8 271 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 PRKD2Q9BZL6 878 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 DSEQ9UL01 958 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 PNMA8BQ9ULN7 279 aaPredicted RBP13.45□□□□□ -0.26
TNC-212ENST00000542877 AK9Q5TCS8 1911 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 BAIAP3O94812 1187 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 ZNF682O95780 498 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 CETPP11597 493 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 NFIL3Q16649 462 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 ILDR1Q86SU0 546 aaPredicted RBP13.45□□□□□ -0.26
TNC-212ENST00000542877 TXNRD3Q86VQ6 643 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 TSEN2Q8NCE0 465 aaKnown RBP13.45□□□□□ -0.26
TNC-212ENST00000542877 TMEM237Q96Q45 408 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 BARX2Q9UMQ3 279 aaPredicted RBP13.45□□□□□ -0.26
TNC-212ENST00000542877 STK25O00506 426 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 B3GAT3O94766 335 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 BCL10O95999 233 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 ME2P23368 584 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 SSTR1P30872 391 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 NSMCE2Q96MF7 247 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 PRRG3Q9BZD7 231 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 FAM192AQ9GZU8 254 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 RRN3Q9NYV6 651 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 SLIT1O75093 1534 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 GPR182O15218 404 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 RAG1P15918 1043 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 GMPSP49915 693 aaPredicted RBP13.45□□□□□ -0.26
TNC-212ENST00000542877 ACAP1Q15027 740 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 PGS1Q32NB8 556 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 ANKRD13AQ8IZ07 590 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 FBXO32Q969P5 355 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
TNC-212ENST00000542877 DNAJC18Q9H819 358 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 GGA2Q9UJY4 613 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 SALL1Q9NSC2 1324 aa13.45□□□□□ -0.26
TNC-212ENST00000542877 H7C4K7 107 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 SMNDC1O75940 238 aaKnown RBP eCLIP13.44□□□□□ -0.26
TNC-212ENST00000542877 C4BPBP20851 252 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 ALDH5A1P51649 535 aaPredicted RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 ELF3P78545 371 aaPredicted RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 VAC14Q08AM6 782 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 MAD2L1Q13257 205 aaPredicted RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 EARS2Q5JPH6 523 aaKnown RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 KYAT3Q6YP21 454 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms