RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 TMEFF1Q8IYR6 380 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 CCDC33Q8N5R6 958 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 OSCP1Q8WVF1 389 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 SENP8Q96LD8 212 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 MTMR9Q96QG7 549 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 TMEM206Q9H813 350 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 RPF1Q9H9Y2 349 aaKnown RBP8.57□□□□□ -1.04
CLPB-211ENST00000542555 FBRSL1Q9HCM7 1045 aaKnown RBP8.57□□□□□ -1.04
CLPB-211ENST00000542555 POLD4Q9HCU8 107 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 TRPC7Q9HCX4 862 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 PTPRHQ9HD43 1115 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 MMP17Q9ULZ9 603 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 TBX20Q9UMR3 447 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 PCDHB5Q9Y5E4 795 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 SDK1Q7Z5N4 2213 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 NUP210Q8TEM1 1887 aaPredicted RBP8.56□□□□□ -1.04
CLPB-211ENST00000542555 ZNF503-AS2A6NEH8 195 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 PRPF40AO75400 957 aaKnown RBP8.56□□□□□ -1.04
CLPB-211ENST00000542555 LARGE1O95461 756 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 APODP05090 189 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 SERPINF2P08697 491 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 OR52Z1P0C646 297 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 CXCL8P10145 99 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 HAPLN1P10915 354 aaPredicted RBP8.56□□□□□ -1.04
CLPB-211ENST00000542555 GNSP15586 552 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 BCKDHBP21953 392 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 P2RY2P41231 377 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 AARSP49588 968 aaKnown RBP eCLIP8.56□□□□□ -1.04
CLPB-211ENST00000542555 OXCT1P55809 520 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 RPL6Q02878 288 aaKnown RBP8.56□□□□□ -1.04
CLPB-211ENST00000542555 SPAG1Q07617 926 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 ORC2Q13416 577 aaPredicted RBP8.56□□□□□ -1.04
CLPB-211ENST00000542555 KCNB1Q14721 858 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 ANKRD1Q15327 319 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 NFE2Q16621 373 aaPredicted RBP8.56□□□□□ -1.04
CLPB-211ENST00000542555 SEZ6Q53EL9 994 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 EARS2Q5JPH6 523 aaKnown RBP8.56□□□□□ -1.04
CLPB-211ENST00000542555 SYCP2LQ5T4T6 812 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 TXNDC8Q6A555 127 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 ZPBP2Q6X784 338 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 TRMT11Q7Z4G4 463 aaKnown RBP8.56□□□□□ -1.04
CLPB-211ENST00000542555 DIS3L2Q8IYB7 885 aaKnown RBP8.56□□□□□ -1.04
CLPB-211ENST00000542555 USP33Q8TEY7 942 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 ADAMTS14Q8WXS8 1223 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 FANCD2OSQ96PS1 177 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 TIPINQ9BVW5 301 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 ZCWPW1Q9H0M4 648 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 SSU72Q9NP77 194 aaKnown RBP8.56□□□□□ -1.04
CLPB-211ENST00000542555 PRDM7Q9NQW5 492 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 GJB4Q9NTQ9 266 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 LRWD1Q9UFC0 647 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 SUSD2Q9UGT4 822 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 CCL26Q9Y258 94 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 WNT6Q9Y6F9 365 aa8.56□□□□□ -1.04
CLPB-211ENST00000542555 OTOL1A6NHN0 477 aaPredicted RBP8.55□□□□□ -1.04
CLPB-211ENST00000542555 BTBD18B2RXH4 712 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 PRRG2O14669 202 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 SLC9A3R1O14745 358 aaPredicted RBP8.55□□□□□ -1.04
CLPB-211ENST00000542555 SLC16A4O15374 487 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 HIP1RO75146 1068 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 LEFTY1O75610 366 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 VNN2O95498 520 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 ZSCAN22P10073 491 aaPredicted RBP8.55□□□□□ -1.04
CLPB-211ENST00000542555 ATF6P18850 670 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 PROZP22891 400 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 LIG4P49917 911 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 LILRA4P59901 499 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 SCRN1Q12765 414 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 IKZF1Q13422 519 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 SDE2Q6IQ49 451 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 MINDY1Q8N5J2 469 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 TTC9BQ8N6N2 239 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 MDGA1Q8NFP4 955 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 SPATA18Q8TC71 538 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 HMGB4Q8WW32 186 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 RLN3Q8WXF3 142 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 ASB11Q8WXH4 323 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 ZBTB45Q96K62 511 aaPredicted RBP8.55□□□□□ -1.04
CLPB-211ENST00000542555 PYM1Q9BRP8 204 aaKnown RBP8.55□□□□□ -1.04
CLPB-211ENST00000542555 DUSP23Q9BVJ7 150 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 TM6SF1Q9BZW5 370 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 FAM124BQ9H5Z6 455 aaPredicted RBP8.55□□□□□ -1.04
CLPB-211ENST00000542555 DDX19AQ9NUU7 478 aaKnown RBP8.55□□□□□ -1.04
CLPB-211ENST00000542555 ARHGAP28Q9P2N2 729 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 MBD1Q9UIS9 605 aaPredicted RBP8.55□□□□□ -1.04
CLPB-211ENST00000542555 PCOLCE2Q9UKZ9 415 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 SNX11Q9Y5W9 270 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 CEP295Q9C0D2 2601 aa8.55□□□□□ -1.04
CLPB-211ENST00000542555 ATXN2Q99700 1313 aaKnown RBP8.54□□□□□ -1.04
CLPB-211ENST00000542555 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.54□□□□□ -1.04
CLPB-211ENST00000542555 B8ZZF3 427 aa8.54□□□□□ -1.04
CLPB-211ENST00000542555 CYB561D2O14569 222 aa8.54□□□□□ -1.04
CLPB-211ENST00000542555 EPB41L2O43491 1005 aaKnown RBP8.54□□□□□ -1.04
CLPB-211ENST00000542555 NDUFS2O75306 463 aa8.54□□□□□ -1.04
CLPB-211ENST00000542555 ZNF217O75362 1048 aa8.54□□□□□ -1.04
CLPB-211ENST00000542555 KLF8O95600 359 aaPredicted RBP8.54□□□□□ -1.04
CLPB-211ENST00000542555 FTH1P19P0C7X4 201 aa8.54□□□□□ -1.04
CLPB-211ENST00000542555 HDCP19113 662 aa8.54□□□□□ -1.04
CLPB-211ENST00000542555 ITPKAP23677 461 aa8.54□□□□□ -1.04
CLPB-211ENST00000542555 NMT1P30419 496 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms