RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 DPP9Q86TI2 863 aa8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 NT5DC3Q86UY8 548 aa8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 ZBTB8OSQ8IWT0 167 aa8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 ANKLE1Q8NAG6 615 aa8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 DQX1Q8TE96 717 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 CASP10Q92851 521 aa8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 SMC6Q96SB8 1091 aa8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 TXLNGYQ9BZA5 131 aa8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 ABHD16BQ9H3Z7 469 aa8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 NPDC1Q9NQX5 325 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 DNAJC17Q9NVM6 304 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 CTNNAL1Q9UBT7 734 aa8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 CNTN6Q9UQ52 1028 aa8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 UMODL1Q5DID0 1318 aa8.29□□□□□ -1.08
PDLIM5-221ENST00000542407 MAGEA13PA6NCF6 341 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 OGTO15294 1046 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 BIRC5O15392 142 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 MAP3K7O43318 606 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 TJP3O95049 919 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 CALCAP01258 141 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 HOXC6P09630 235 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 SPATA31D3P0C874 917 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 BRAFP15056 766 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 TNNI1P19237 187 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 GJA9P57773 515 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 CDR2Q01850 454 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 EEF1DP3Q658K8 133 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 OLFML2BQ68BL8 750 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 RFWD3Q6PCD5 774 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 LVRNQ6Q4G3 990 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 MPZL3Q6UWV2 235 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 SPATA31D4Q6ZUB0 917 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ZBTB33Q86T24 672 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 WDR49Q8IV35 697 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 PPFIBP2Q8ND30 876 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 IFT43Q96FT9 208 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 HES6Q96HZ4 224 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ZNF668Q96K58 619 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 NLRP4Q96MN2 994 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 LRMDAQ9H2I8 198 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 CCSER2Q9H7U1 834 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 DCLRE1BQ9H816 532 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ZDHHC18Q9NUE0 388 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 MTRF1LQ9UGC7 380 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 TTC7AQ9ULT0 858 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 PTPN22Q9Y2R2 807 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ZNF711Q9Y462 761 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 CAPN9O14815 690 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 KRT36O76013 467 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 FTLP02792 175 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ABCB4P21439 1286 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ADCY8P40145 1251 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 TFDP1Q14186 410 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 PARP6Q2NL67 630 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ATF7IP2Q5U623 682 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 DSTYKQ6XUX3 929 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 JAMLQ86YT9 394 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 PPP1R14CQ8TAE6 165 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 PTPRN2Q92932 1015 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 HIC2Q96JB3 615 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 NELL2Q99435 816 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 GBA3Q9H227 469 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ERVK-5Q9HDB9 667 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 C1orf112Q9NSG2 853 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ETNK2Q9NVF9 386 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 TRIM17Q9Y577 477 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ARHGAP33O14559 1287 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ZNF865P0CJ78 1059 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 CUL2Q13617 745 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 LLGL1Q15334 1064 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 STK11Q15831 433 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 ANKDD1AQ495B1 522 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 DUPD1Q68J44 220 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 IQSEC1Q6DN90 963 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 CGB2Q6NT52 195 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 DUS1LQ6P1R4 473 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 C17orf99Q6UX52 265 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 CHPFQ8IZ52 775 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 AADATQ8N5Z0 425 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 MAML1Q92585 1016 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 SDCCAG3Q96C92 435 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 C18orf8Q96DM3 657 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 CDT1Q9H211 546 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 NKIRAS1Q9NYS0 192 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 PRKAG3Q9UGI9 489 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 AMFRQ9UKV5 643 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 TNFSF13BQ9Y275 285 aa8.28□□□□□ -1.08
PDLIM5-221ENST00000542407 PASKQ96RG2 1323 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 FAM155AB1AL88 458 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 H3BRB1 525 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 MAGEB2O15479 319 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 DDX3YO15523 660 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 RIPK2O43353 540 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 KLHL41O60662 606 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 WEE1P30291 646 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 HAAOP46952 286 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 RASSF2P50749 326 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 MPP2Q14168 576 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 CLEC16AQ2KHT3 1053 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms