RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 ADRA1DP25100 572 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 COPB1P53618 953 aaKnown RBP4.58□□□□□ -1.68
KNTC1-211ENST00000541427 ATP1A4Q13733 1029 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 RAB30Q15771 203 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 AASDHQ4L235 1098 aaPredicted RBP4.58□□□□□ -1.68
KNTC1-211ENST00000541427 FBXO38Q6PIJ6 1188 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 ZNF66Q6ZN08 573 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 KRT73Q86Y46 540 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.58□□□□□ -1.68
KNTC1-211ENST00000541427 PNPLA1Q8N8W4 532 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 Q8N9P0 234 aaPredicted RBP4.58□□□□□ -1.68
KNTC1-211ENST00000541427 SEMA6DQ8NFY4 1073 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 ABHD5Q8WTS1 349 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 EDC3Q96F86 508 aaKnown RBP4.58□□□□□ -1.68
KNTC1-211ENST00000541427 PRR11Q96HE9 360 aaPredicted RBP4.58□□□□□ -1.68
KNTC1-211ENST00000541427 NECTIN3Q9NQS3 549 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 SNX15Q9NRS6 342 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 TMOD4Q9NZQ9 345 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 IGSF9Q9P2J2 1179 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 CEP83Q9Y592 693 aa4.58□□□□□ -1.68
KNTC1-211ENST00000541427 THOC2Q8NI27 1593 aaKnown RBP4.57□□□□□ -1.68
KNTC1-211ENST00000541427 PRAMEF2O60811 474 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 LATS1O95835 1130 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 MT-CO3P00414 261 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 MBPP02686 304 aaPredicted RBP4.57□□□□□ -1.68
KNTC1-211ENST00000541427 IDEP14735 1019 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 GPC5P78333 572 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 BTKQ06187 659 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 NSUN2Q08J23 767 aaKnown RBP eCLIP4.57□□□□□ -1.68
KNTC1-211ENST00000541427 AWAT1Q58HT5 328 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 PTF1AQ7RTS3 328 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 MAFAQ8NHW3 353 aaPredicted RBP4.57□□□□□ -1.68
KNTC1-211ENST00000541427 IPO4Q8TEX9 1081 aaKnown RBP4.57□□□□□ -1.68
KNTC1-211ENST00000541427 KAZALD1Q96I82 304 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 TTLL2Q9BWV7 592 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 SAP30LQ9HAJ7 183 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 VPS45Q9NRW7 570 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 TM7SF3Q9NS93 570 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 TFCP2L1Q9NZI6 479 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 SLC39A10Q9ULF5 831 aa4.57□□□□□ -1.68
KNTC1-211ENST00000541427 RAD54L2Q9Y4B4 1467 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 ABHD14A-ACY1A0A1B0GW23 586 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 PRRT4C9JH25 899 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 PCDH17O14917 1159 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 HNRNPDLO14979 420 aaKnown RBP4.56□□□□□ -1.68
KNTC1-211ENST00000541427 ADAMTS3O15072 1205 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 ZSCAN9O15535 394 aaPredicted RBP4.56□□□□□ -1.68
KNTC1-211ENST00000541427 SETSIPP0DME0 302 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 DRD1P21728 446 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 RHBDL3P58872 404 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 TUBA4AP68366 448 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 DNASE1L3Q13609 305 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 KCNJ12Q14500 433 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 FAM187BQ17R55 369 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 TMEM196Q5HYL7 178 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 FAM90A2PQ658T7 463 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 DENND2CQ68D51 928 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 SERPINA13PQ6UXR4 307 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 SYTL1Q8IYJ3 562 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 SAMD3Q8N6K7 520 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 C12orf76Q8N812 135 aaPredicted RBP4.56□□□□□ -1.68
KNTC1-211ENST00000541427 PNLDC1Q8NA58 520 aaKnown RBP4.56□□□□□ -1.68
KNTC1-211ENST00000541427 ACRBPQ8NEB7 543 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 MUL1Q969V5 352 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 GRAMD1AQ96CP6 724 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 TMEM41AQ96HV5 264 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 VPS50Q96JG6 964 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 MPHOSPH6Q99547 160 aaKnown RBP4.56□□□□□ -1.68
KNTC1-211ENST00000541427 WDR12Q9GZL7 423 aaKnown RBP4.56□□□□□ -1.68
KNTC1-211ENST00000541427 ARFGAP3Q9NP61 516 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 FSCN3Q9NQT6 498 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 GAR1Q9NY12 217 aaKnown RBP4.56□□□□□ -1.68
KNTC1-211ENST00000541427 DTNAQ9Y4J8 743 aa4.56□□□□□ -1.68
KNTC1-211ENST00000541427 CLIP1P30622 1438 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 VPS8Q8N3P4 1428 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 POC1B-GALNT4F8VUJ3 575 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 H3BNC9 293 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 PIP5K1BO14986 540 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 VIPP01282 170 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 ZNF81P51508 661 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 RAE1P78406 368 aaKnown RBP4.55□□□□□ -1.68
KNTC1-211ENST00000541427 CFHR3Q02985 330 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 LARS2Q15031 903 aaKnown RBP4.55□□□□□ -1.68
KNTC1-211ENST00000541427 BRD3Q15059 726 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 GPR162Q16538 588 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 PIK3AP1Q6ZUJ8 805 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 C1QL2Q7Z5L3 287 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 P3H2Q8IVL5 708 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 SPICE1Q8N0Z3 855 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 CLASRPQ8N2M8 674 aaKnown RBP4.55□□□□□ -1.68
KNTC1-211ENST00000541427 GALNT4Q8N4A0 578 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 ADAMTS18Q8TE60 1221 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 DDB2Q92466 427 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 ASB2Q96Q27 587 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 USP29Q9HBJ7 922 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 TAGLN3Q9UI15 199 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 FZD4Q9ULV1 537 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 DAAM1Q9Y4D1 1078 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 ARAP1Q96P48 1450 aa4.55□□□□□ -1.68
KNTC1-211ENST00000541427 CTTNBP2Q8WZ74 1663 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms