RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CYP4A11Q02928 519 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 DNAJC3Q13217 504 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 RCN2Q14257 317 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 PIGHQ14442 188 aaPredicted RBP10.8□□□□□ -0.68
CHFR-219ENST00000541341 ADGRD1Q6QNK2 874 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 HFE2Q6ZVN8 426 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 ARHGAP22Q7Z5H3 698 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 POLNQ7Z5Q5 900 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 RTN4RL1Q86UN2 441 aaPredicted RBP10.8□□□□□ -0.68
CHFR-219ENST00000541341 PHF13Q86YI8 300 aaPredicted RBP10.8□□□□□ -0.68
CHFR-219ENST00000541341 TMEM126BQ8IUX1 230 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 PPIL6Q8IXY8 311 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 PDIK1LQ8N165 341 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 PDCD7Q8N8D1 485 aaKnown RBP10.8□□□□□ -0.68
CHFR-219ENST00000541341 CATSPER1Q8NEC5 780 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 PYROXD1Q8WU10 500 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 C1orf54Q8WWF1 131 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 SCG3Q8WXD2 468 aaKnown RBP10.8□□□□□ -0.68
CHFR-219ENST00000541341 IRGQQ8WZA9 623 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 ITFG2Q969R8 447 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 MTBPQ96DY7 904 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 GORASP1Q9BQQ3 440 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 FAM167BQ9BTA0 163 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 C11orf84Q9BUA3 381 aaPredicted RBP10.8□□□□□ -0.68
CHFR-219ENST00000541341 TSSK1BQ9BXA7 367 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 DENND2DQ9H6A0 471 aaPredicted RBP10.8□□□□□ -0.68
CHFR-219ENST00000541341 VPS37BQ9H9H4 285 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 MRGBPQ9NV56 204 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 TAS2R14Q9NYV8 317 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 HACD3Q9P035 362 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 DLGAP2Q9P1A6 1054 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 HCSTQ9UBK5 93 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 ZNF148Q9UQR1 794 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 GINS2Q9Y248 185 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 C2CD2Q9Y426 696 aa10.8□□□□□ -0.68
CHFR-219ENST00000541341 HBP1O60381 514 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 DGKIO75912 1065 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 STK10O94804 968 aaKnown RBP10.79□□□□□ -0.68
CHFR-219ENST00000541341 LSM8O95777 96 aaKnown RBP10.79□□□□□ -0.68
CHFR-219ENST00000541341 LDHAP00338 332 aaKnown RBP10.79□□□□□ -0.68
CHFR-219ENST00000541341 MT-ND3P03897 115 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 TRIM49P0CI25 452 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 TRIM49CP0CI26 452 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 UNGP13051 313 aaPredicted RBP10.79□□□□□ -0.68
CHFR-219ENST00000541341 CNTFP26441 200 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 YWHABP31946 246 aaKnown RBP10.79□□□□□ -0.68
CHFR-219ENST00000541341 FOXN2P32314 431 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 ABL2P42684 1182 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 KCNJ1P48048 391 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 CACNA2D1P54289 1103 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 RAB15P59190 212 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 MGAT5Q09328 741 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 ASPHQ12797 758 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 LAMB3Q13751 1172 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 CAMK1Q14012 370 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 TARBP2Q15633 366 aaKnown RBP10.79□□□□□ -0.68
CHFR-219ENST00000541341 HIF1AQ16665 826 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 P3H1Q32P28 736 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 PUS10Q3MIT2 529 aaKnown RBP10.79□□□□□ -0.68
CHFR-219ENST00000541341 TMCO4Q5TGY1 634 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 CGB2Q6NT52 195 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 LVRNQ6Q4G3 990 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 PADI6Q6TGC4 694 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 KYAT3Q6YP21 454 aaKnown RBP10.79□□□□□ -0.68
CHFR-219ENST00000541341 FAM47EQ6ZV65 393 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 ANO5Q75V66 913 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 OTOAQ7RTW8 1153 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 RSPH3Q86UC2 560 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 LCA5Q86VQ0 697 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 ADHFE1Q8IWW8 467 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 ALLCQ8N6M5 410 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 SLC20A1Q8WUM9 679 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 SPIRE2Q8WWL2 714 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 GATA6Q92908 595 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 KCNN1Q92952 543 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 UTP4Q969X6 686 aaKnown RBP10.79□□□□□ -0.68
CHFR-219ENST00000541341 DDX27Q96GQ7 796 aaKnown RBP10.79□□□□□ -0.68
CHFR-219ENST00000541341 FBXL18Q96ME1 805 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 C7orf26Q96N11 449 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 FIZ1Q96SL8 496 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 ACSS3Q9H6R3 686 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 RC3H2Q9HBD1 1191 aaKnown RBP10.79□□□□□ -0.68
CHFR-219ENST00000541341 NRBP2Q9NSY0 501 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 NMRK1Q9NWW6 199 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 ZDHHC7Q9NXF8 308 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 NDE1Q9NXR1 346 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 TBK1Q9UHD2 729 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 STRIP2Q9ULQ0 834 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 GMEB1Q9Y692 573 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 MYO10Q9HD67 2058 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 MUC6Q6W4X9 2439 aa10.79□□□□□ -0.68
CHFR-219ENST00000541341 ZBTB42B2RXF5 422 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 POC1B-GALNT4F8VUJ3 575 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 SPECC1L-ADORA2AF8WAN1 911 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 TRDMT1O14717 391 aaKnown RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 CAPN9O14815 690 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 PER2O15055 1255 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 CYP26A1O43174 497 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 LIASO43766 372 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 KRT37O76014 449 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms