RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 TRIM33Q9UPN9 1127 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 VWA8A3KMH1 1905 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 MICAL3Q7RTP6 2002 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 SUN1O94901 812 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 ACSL3O95573 720 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 TRUB2O95900 331 aaKnown RBP15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 KRT7P08729 469 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 CDC25CP30307 473 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 RPL34P49207 117 aaKnown RBP15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 BNIP1Q12981 228 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 BZW1Q7L1Q6 419 aaKnown RBP15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 GPRIN1Q7Z2K8 1008 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 POLNQ7Z5Q5 900 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 LRRTM3Q86VH5 581 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 ADAM33Q9BZ11 813 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 KANSL3Q9P2N6 904 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 HGSO14964 777 aaPredicted RBP15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 OR4Q2P0C623 313 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 BDNFP23560 247 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 PBX3P40426 434 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 CETN2P41208 172 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 ATXN1P54253 815 aaKnown RBP15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 DYNLT1P63172 113 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 YWHAHQ04917 246 aaPredicted RBP15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 TFDP3Q5H9I0 405 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 INTS6LQ5JSJ4 861 aaKnown RBP15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 VSTM1Q6UX27 236 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 SIX6OS1Q8N1H7 587 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 FITM2Q8N6M3 262 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 ANKRD42Q8N9B4 389 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 KCTD6Q8NC69 237 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 ZMIZ2Q8NF64 920 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 CASD1Q96PB1 797 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 ACBD6Q9BR61 282 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 CDC42EP4Q9H3Q1 356 aaKnown RBP15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 KCNK9Q9NPC2 374 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 DSEQ9UL01 958 aa15.88■□□□□ 0.13
CLPTM1-202ENST00000541297 FNDC1Q4ZHG4 1894 aaPredicted RBP15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 NLRC5Q86WI3 1866 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 UPP2O95045 317 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 CDKN2BP42772 138 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 TKTL1P51854 596 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 ACAP1Q15027 740 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 SLC26A9Q7LBE3 791 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 GDAP1Q8TB36 358 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 ROPN1BQ9BZX4 212 aaPredicted RBP15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 DCLK3Q9C098 648 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 LRRC19Q9H756 370 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 NRDE2Q9H7Z3 1164 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 ROPN1Q9HAT0 212 aaPredicted RBP15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 CTNNAL1Q9UBT7 734 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 PTPRDP23468 1912 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 hCG_1818297A0A087WSY0 165 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 C3orf70A6NLC5 250 aaPredicted RBP15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 NT5C1B-RDH14C9J2C7 533 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 PRPSAP2O60256 369 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 TADA2AO75478 443 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 CCND1P24385 295 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 ADCY1Q08828 1119 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 THEM5Q8N1Q8 247 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 C12orf50Q8NA57 414 aaPredicted RBP15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 MAIP1Q8WWC4 291 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 APBB2Q92870 758 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 B3GALT6Q96L58 329 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 RUNDC3BQ96NL0 473 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 CALN1Q9BXU9 219 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 ELAC1Q9H777 363 aaKnown RBP15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 CYLDQ9NQC7 956 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 GPATCH2LQ9NWQ4 482 aa15.87■□□□□ 0.13
CLPTM1-202ENST00000541297 KDELR1P24390 212 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 PCK1P35558 622 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 ZKSCAN8Q15776 578 aaPredicted RBP15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 CYP4V2Q6ZWL3 525 aaPredicted RBP15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 SPATA21Q7Z572 469 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 SMARCD1Q96GM5 515 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 ARHGEF3Q9NR81 526 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 SAE1Q9UBE0 346 aaPredicted RBP15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 NRP1O14786 923 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 TJP3O95049 919 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 MPP2Q14168 576 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 FAM171BQ6P995 826 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 PAWRQ96IZ0 340 aaKnown RBP15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 BATF3Q9NR55 127 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 AAASQ9NRG9 546 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 PCDHB8Q9UN66 801 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 ARL2BPQ9Y2Y0 163 aa15.86■□□□□ 0.13
CLPTM1-202ENST00000541297 SYNJ2BP-COX16A0A087WUM0 186 aa15.85■□□□□ 0.13
CLPTM1-202ENST00000541297 TBKBP1A7MCY6 615 aa15.85■□□□□ 0.13
CLPTM1-202ENST00000541297 DPYSL4O14531 572 aa15.85■□□□□ 0.13
CLPTM1-202ENST00000541297 MSH2P43246 934 aa15.85■□□□□ 0.13
CLPTM1-202ENST00000541297 HDAC4P56524 1084 aa15.85■□□□□ 0.13
CLPTM1-202ENST00000541297 MRPS5P82675 430 aaKnown RBP15.85■□□□□ 0.13
CLPTM1-202ENST00000541297 CALCOCO2Q13137 446 aa15.85■□□□□ 0.13
CLPTM1-202ENST00000541297 MMRN1Q13201 1228 aa15.85■□□□□ 0.13
CLPTM1-202ENST00000541297 TRIP13Q15645 432 aaPredicted RBP15.85■□□□□ 0.13
CLPTM1-202ENST00000541297 FBXO46Q6PJ61 603 aaPredicted RBP15.85■□□□□ 0.13
CLPTM1-202ENST00000541297 HFE2Q6ZVN8 426 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms