RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 C8AP07357 584 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 ZDHHC11BP0C7U3 371 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 RARGP13631 454 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 PTPN2P17706 415 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 GTF2F1P35269 517 aaKnown RBP eCLIP12.25□□□□□ -0.45
VTN-202ENST00000539746 CXCR3P49682 368 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 CDH6P55285 790 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 OXCT1P55809 520 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 NRG1Q02297 640 aaPredicted RBP12.25□□□□□ -0.45
VTN-202ENST00000539746 SLC25A11Q02978 314 aaKnown RBP12.25□□□□□ -0.45
VTN-202ENST00000539746 TWF1Q12792 350 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 IFRD2Q12894 506 aaPredicted RBP12.25□□□□□ -0.45
VTN-202ENST00000539746 TAF10Q12962 218 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 NME3Q13232 169 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 TRIP4Q15650 581 aaPredicted RBP12.25□□□□□ -0.45
VTN-202ENST00000539746 CCNG2Q16589 344 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 C10orf120Q5SQS8 335 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 PLPP4Q5VZY2 271 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 DRICH1Q6PGQ1 229 aaPredicted RBP12.25□□□□□ -0.45
VTN-202ENST00000539746 CNPY4Q8N129 248 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 MMGT1Q8N4V1 131 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 TSC1Q92574 1164 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 MARCH2Q9P0N8 246 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 MAGED2Q9UNF1 606 aaPredicted RBP12.25□□□□□ -0.45
VTN-202ENST00000539746 SLC27A5Q9Y2P5 690 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 A0A0U1RQJ8 604 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 HACD1B0YJ81 288 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 APOC4-APOC2K7ER74 178 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 PIK3R2O00459 728 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 RIOK3O14730 519 aaKnown RBP12.24□□□□□ -0.45
VTN-202ENST00000539746 APOL1O14791 398 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 PPP1R12AO14974 1030 aaPredicted RBP12.24□□□□□ -0.45
VTN-202ENST00000539746 MCF2LO15068 1137 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 IRAK2O43187 625 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 TLR5O60602 858 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 ZMYND10O75800 440 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 APOC2P02655 101 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 HOXB8P17481 243 aaPredicted RBP12.24□□□□□ -0.45
VTN-202ENST00000539746 KDELR1P24390 212 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 STIP1P31948 543 aaKnown RBP12.24□□□□□ -0.45
VTN-202ENST00000539746 L1CAMP32004 1257 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 ADRA1BP35368 520 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 GJC1P36383 396 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 ETFBP38117 255 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 TBX4P57082 545 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 ZNF33AQ06730 810 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 RABGAP1LQ5R372 815 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 TMCO4Q5TGY1 634 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 LILRA6Q6PI73 481 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 SPOCD1Q6ZMY3 1216 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 PHLDB2Q86SQ0 1253 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 IFT20Q8IY31 132 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 TMEM130Q8N3G9 435 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 CCDC89Q8N998 374 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 C12orf50Q8NA57 414 aaPredicted RBP12.24□□□□□ -0.45
VTN-202ENST00000539746 DQX1Q8TE96 717 aaKnown RBP12.24□□□□□ -0.45
VTN-202ENST00000539746 ATRIPQ8WXE1 791 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 HSPH1Q92598 858 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 P3H4Q92791 437 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 TIFAQ96CG3 184 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 MRPL38Q96DV4 380 aaKnown RBP12.24□□□□□ -0.45
VTN-202ENST00000539746 BTBD6Q96KE9 485 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 B3GALT6Q96L58 329 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 CARD6Q9BX69 1037 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 VN1R3Q9BXE9 311 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 TLE6Q9H808 572 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 SFXN1Q9H9B4 322 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.24□□□□□ -0.45
VTN-202ENST00000539746 HCSTQ9UBK5 93 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 TJP2Q9UDY2 1190 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 PCSK1NQ9UHG2 260 aa12.24□□□□□ -0.45
VTN-202ENST00000539746 TRAV19A0A0A6YYK7 116 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 A0A1W2PQH9 124 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 PHF2O75151 1096 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 ECEL1O95672 775 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 RARAP10276 462 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 RPL17P18621 184 aaKnown RBP12.23□□□□□ -0.45
VTN-202ENST00000539746 CXCR5P32302 372 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 RGS19P49795 217 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 CLCN4P51793 760 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 HDAC4P56524 1084 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 CAV1Q03135 178 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 XRCC4Q13426 336 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 BBS12Q6ZW61 710 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 BNIPLQ7Z465 357 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 TMCO2Q7Z6W1 182 aaPredicted RBP12.23□□□□□ -0.45
VTN-202ENST00000539746 DNAJB7Q7Z6W7 309 aaPredicted RBP12.23□□□□□ -0.45
VTN-202ENST00000539746 RFX6Q8HWS3 928 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 CCDC105Q8IYK2 499 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 ATL2Q8NHH9 583 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 SCAMP5Q8TAC9 235 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 FAM71BQ8TC56 605 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 PSMB7Q99436 277 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 LPIN3Q9BQK8 851 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 DHX35Q9H5Z1 703 aaKnown RBP12.23□□□□□ -0.45
VTN-202ENST00000539746 LRRC19Q9H756 370 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 ALG13Q9NP73 1137 aaKnown RBP12.23□□□□□ -0.45
VTN-202ENST00000539746 GMIPQ9P107 970 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 FZD10Q9ULW2 581 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 PACSIN2Q9UNF0 486 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms