RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	PAFAH2	Q99487	392 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SLC39A8	Q9C0K1	460 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MMADHC	Q9H3L0	296 aa	Predicted RBP	9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PCDH9	Q9HC56	1237 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FAM153A	Q9UHL3	310 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ACOT9	Q9Y305	439 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680		E9PBE3	544 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ZBTB39	O15060	712 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	AMH	P03971	560 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TMED10	P49755	219 aa	Known RBP	9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RAD23A	P54725	363 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GRIK3	Q13003	919 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GIT2	Q14161	759 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TRIM16L	Q309B1	348 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PHACTR4	Q8IZ21	702 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ZNF655	Q8N720	491 aa	Predicted RBP	9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FAM45A	Q8TCE6	357 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MAGEC3	Q8TD91	643 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CAVIN3	Q969G5	261 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	VCPIP1	Q96JH7	1222 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ELOVL6	Q9H5J4	265 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TRIM10	Q9UDY6	481 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	VANGL2	Q9ULK5	521 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	KIAA1210	Q9ULL0	1709 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	BACE1	P56817	501 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	OTUD4	Q01804	1114 aa	Known RBP	9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	COX10	Q12887	443 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	LAYN	Q6UX15	382 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SETD9	Q8NE22	299 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	C19orf18	Q8NEA5	215 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MOSPD2	Q8NHP6	518 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GLMN	Q92990	594 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	DCLK3	Q9C098	648 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TMEM39B	Q9GZU3	492 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SLITRK2	Q9H156	845 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	VTA1	Q9NP79	307 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	HEY2	Q9UBP5	337 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	DNPEP	Q9ULA0	475 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NRXN1	Q9ULB1	1477 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SLC12A8	A0AV02	714 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	E2F8	A0AVK6	867 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680		H3BMM5	538 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GUCY1B2	O75343	617 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CPSF4	O95639	269 aa	Known RBP	9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	UBTFL6	P0CB48	400 aa	Predicted RBP	9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	YWHAQ	P27348	245 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CCR1	P32246	355 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SKIV2L2	P42285	1042 aa	Known RBP	9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NPTX2	P47972	431 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ZNF268	Q14587	947 aa	Predicted RBP	9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SLC9A5	Q14940	896 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FAM120B	Q96EK7	910 aa	Known RBP	9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SMARCD1	Q96GM5	515 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SERPINB11	Q96P15	392 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TMEM120A	Q9BXJ8	343 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CAAP1	Q9H8G2	361 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NOD2	Q9HC29	1040 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GPAM	Q9HCL2	828 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	LZTS1	Q9Y250	596 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SALL1	Q9NSC2	1324 aa		9.24	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NR5A2	O00482	541 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RGL2	O15211	777 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	KCNQ2	O43526	872 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NBN	O60934	754 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SNUPN	O95149	360 aa	Known RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	IGSF6	O95976	241 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CPA3	P15088	417 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CDH17	Q12864	832 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	STARD3	Q14849	445 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PLCL1	Q15111	1095 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TSN	Q15631	228 aa	Known RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	DDR2	Q16832	855 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	OLFML2B	Q68BL8	750 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ACOT1	Q86TX2	421 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	USP7	Q93009	1102 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MTERF3	Q96E29	417 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TBL1Y	Q9BQ87	522 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	UGT2B28	Q9BY64	529 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	OSBPL6	Q9BZF3	934 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FANCE	Q9HB96	536 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MIEF1	Q9NQG6	463 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PLAGL2	Q9UPG8	496 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	hCG_2014768	A0A024R1R8	64 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GNG14	A0A1W2PPG7	69 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CENPX	A8MT69	81 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CD3EAP	O15446	510 aa	Known RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SLC37A4	O43826	429 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PAEP	P09466	180 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	UQCRB	P14927	111 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CYP2F1	P24903	491 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CSE1L	P55060	971 aa	Known RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	YWHAZ	P63104	245 aa	Known RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PRKAA1	Q13131	559 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SHROOM1	Q2M3G4	852 aa	Predicted RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	WASHC2D	Q5SRD0	308 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PAPD7	Q5XG87	772 aa	Known RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	METTL7B	Q6UX53	244 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	LRRC34	Q8IZ02	419 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	OR56A4	Q8NGH8	313 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	POP5	Q969H6	163 aa	Known RBP	9.23	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms