RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 NAF1Q96HR8 494 aaKnown RBP12.73□□□□□ -0.37
YBX3-207ENST00000539204 ANKRD36BP1Q96IX9 119 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 TRIM9Q9C026 710 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 ZNF518BQ9C0D4 1074 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 MTMR12Q9C0I1 747 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 IKZF4Q9H2S9 585 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 CPNE5Q9HCH3 593 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.73□□□□□ -0.37
YBX3-207ENST00000539204 PLK2Q9NYY3 685 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 LSM7Q9UK45 103 aaKnown RBP12.73□□□□□ -0.37
YBX3-207ENST00000539204 SLC27A6Q9Y2P4 619 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 PTPRJQ12913 1337 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 VWA3AA6NCI4 1184 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 TSPAN3O60637 253 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 FSBPO95073 299 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 EPHX1P07099 455 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 ZDHHC11BP0C7U3 371 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 ACADVLP49748 655 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 BCAT1P54687 386 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 PCBP4P57723 403 aaKnown RBP12.72□□□□□ -0.37
YBX3-207ENST00000539204 ILKQ13418 452 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 LAYNQ6UX15 382 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 PRICKLE2Q7Z3G6 844 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 CACUL1Q86Y37 369 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 ZSWIM2Q8NEG5 633 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 CALML4Q96GE6 196 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 FAM84AQ96KN4 292 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 KCNK16Q96T55 309 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 ELF4Q99607 663 aaPredicted RBP12.72□□□□□ -0.37
YBX3-207ENST00000539204 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
YBX3-207ENST00000539204 ACE2Q9BYF1 805 aaPredicted RBP12.72□□□□□ -0.37
YBX3-207ENST00000539204 BTBD1Q9H0C5 482 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 PDE11AQ9HCR9 933 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 TMEM30AQ9NV96 361 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 COMMD8Q9NX08 183 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 NXF1Q9UBU9 619 aaKnown RBP12.72□□□□□ -0.37
YBX3-207ENST00000539204 EXOC7Q9UPT5 735 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 CLCA2Q9UQC9 943 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 PTPN13Q12923 2485 aa12.72□□□□□ -0.37
YBX3-207ENST00000539204 USP9XQ93008 2570 aaPredicted RBP12.72□□□□□ -0.37
YBX3-207ENST00000539204 CLDN5O00501 218 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 TLR5O60602 858 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 SEMA4FO95754 770 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 TBX18O95935 607 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 TNNC2P02585 160 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 FAM163BP0C2L3 166 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 ATP5C1P36542 298 aaKnown RBP12.71□□□□□ -0.37
YBX3-207ENST00000539204 ANAPC15P60006 121 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 RACK1P63244 317 aaKnown RBP12.71□□□□□ -0.37
YBX3-207ENST00000539204 ZNF234Q14588 700 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 COLEC12Q5KU26 742 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 SAP25Q8TEE9 199 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 NOC3LQ8WTT2 800 aaKnown RBP12.71□□□□□ -0.37
YBX3-207ENST00000539204 TSC1Q92574 1164 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 TTC9Q92623 222 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 HVCN1Q96D96 273 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 ZNF578Q96N58 590 aaPredicted RBP12.71□□□□□ -0.37
YBX3-207ENST00000539204 MRPL45Q9BRJ2 306 aaKnown RBP12.71□□□□□ -0.37
YBX3-207ENST00000539204 B3GNT5Q9BYG0 378 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 LHX5Q9H2C1 402 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 ELOVL2Q9NXB9 296 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 IL37Q9NZH6 218 aa12.71□□□□□ -0.37
YBX3-207ENST00000539204 GOLGA8IPA6NC78 632 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 GOLGA8JA6NMD2 632 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 VILLO15195 856 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 SLC26A4O43511 780 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 TIMM44O43615 452 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 TACC1O75410 805 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 UBA7P41226 1012 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 SLC5A3P53794 718 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 MFAP3P55082 362 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 MCM6Q14566 821 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 GEN1Q17RS7 908 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 DUOXA2Q1HG44 320 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 CCDC83Q8IWF9 413 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 DHX40Q8IX18 779 aaKnown RBP12.7□□□□□ -0.38
YBX3-207ENST00000539204 LSMEM2Q8N112 164 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 FAM184AQ8NB25 1140 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 OR2T3Q8NH03 318 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 ACCSQ96QU6 501 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 LLPHQ9BRT6 129 aaKnown RBP12.7□□□□□ -0.38
YBX3-207ENST00000539204 IGSF5Q9NSI5 407 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 INTS13Q9NVM9 706 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 TMEM131Q92545 1883 aa12.7□□□□□ -0.38
YBX3-207ENST00000539204 FAM92AA1XBS5 289 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 A8MXQ7 604 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 YKT6O15498 198 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 KLK10O43240 276 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 PRPF6O94906 941 aaKnown RBP12.69□□□□□ -0.38
YBX3-207ENST00000539204 CKMT2P17540 419 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 GARTP22102 1010 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 PLA2G4AP47712 749 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 NEK4P51957 841 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 ARID5AQ03989 594 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 VAC14Q08AM6 782 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 KCNA1Q09470 495 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 ST3GAL1Q11201 340 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 SERPINA13PQ6UXR4 307 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 SYCP3Q8IZU3 236 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms