RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	WBP2	Q969T9	261 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	NAA15	Q9BXJ9	866 aa	Known RBP	12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SLC2A11	Q9BYW1	496 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	NAT10	Q9H0A0	1025 aa	Known RBP	12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ARHGEF4	Q9NR80	690 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ASNSD1	Q9NWL6	643 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	RASAL2	Q9UJF2	1139 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SLC8A2	Q9UPR5	921 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SLC27A6	Q9Y2P4	619 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	FOXN3	O00409	490 aa	Predicted RBP	12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	NPC1	O15118	1278 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	THAP12	O43422	761 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TULP3	O75386	442 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	IGLV3-27	P01718	113 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	KLKB1	P03952	638 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	UCHL3	P15374	230 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	CDH5	P33151	784 aa	Predicted RBP	12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	KIR2DL1	P43626	348 aa	Predicted RBP	12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	MTA1	Q13330	715 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ARHGAP44	Q17R89	818 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	MPP7	Q5T2T1	576 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	NUGGC	Q68CJ6	796 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	MIB1	Q86YT6	1006 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ZNF557	Q8N988	423 aa	Predicted RBP	12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TERB1	Q8NA31	727 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	NOX5	Q96PH1	765 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	BBS2	Q9BXC9	721 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	STK33	Q9BYT3	514 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	LIMA1	Q9UHB6	759 aa	Known RBP	12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	NUDT5	Q9UKK9	219 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	MMP17	Q9ULZ9	603 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	CEP83	Q9Y592	693 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828		R4GN57	208 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	MYO15A	Q9UKN7	3530 aa		12.86	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SLC12A8	A0AV02	714 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	GFRA2	O00451	464 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	MDM4	O15151	490 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	IRAK2	O43187	625 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	LRP3	O75074	770 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	CYBB	P04839	570 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	IRF1	P10914	325 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	LCP1	P13796	627 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TYR	P14679	529 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ZNF18	P17022	549 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	CORO1A	P31146	461 aa	Known RBP	12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	CLCN1	P35523	988 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	KRT9	P35527	623 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SCNN1A	P37088	669 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	DGKE	P52429	567 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	KRT31	Q15323	416 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ANO4	Q32M45	955 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	FKBP15	Q5T1M5	1219 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	RNF43	Q68DV7	783 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	GRAMD4	Q6IC98	578 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	GJB7	Q6PEY0	223 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	C11orf74	Q86VG3	221 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	C12orf40	Q86WS4	652 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ZNF677	Q86XU0	584 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ZDHHC17	Q8IUH5	632 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	FMNL3	Q8IVF7	1028 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	RPLP0P6	Q8NHW5	317 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	RUBCN	Q92622	972 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SERPINB11	Q96P15	392 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	MIS12	Q9H081	205 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	FANCL	Q9NW38	375 aa		12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	AGO1	Q9UL18	857 aa	Known RBP	12.85	□□□□□ -0.35
CLTCL1-205	ENST00000538828	APBB3	O95704	486 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	FYN	P06241	537 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	CISD3	P0C7P0	127 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	HNRNPL	P14866	589 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SLC6A11	P48066	632 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	RGS7	P49802	495 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TYRO3	Q06418	890 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	PDCL	Q13371	301 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	EIF4EBP2	Q13542	120 aa	Predicted RBP	12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	DMC1	Q14565	340 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	DRAP1	Q14919	205 aa	Predicted RBP	12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	NCAPH	Q15003	741 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	EIF4H	Q15056	248 aa	Known RBP	12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	CRY1	Q16526	586 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	KLHL40	Q2TBA0	621 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	MPPE1	Q53F39	396 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	EOGT	Q5NDL2	527 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ADGRF1	Q5T601	910 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	FYB2	Q5VWT5	728 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	NAIF1	Q69YI7	327 aa	Predicted RBP	12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	LAIR1	Q6GTX8	287 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	DENND1B	Q6P3S1	775 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	PKN3	Q6P5Z2	889 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TSSK4	Q6SA08	328 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	RASSF3	Q86WH2	238 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SCUBE3	Q8IX30	993 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	IL17RC	Q8NAC3	791 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	C1orf131	Q8NDD1	294 aa	Known RBP	12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ZNF397	Q8NF99	534 aa	Predicted RBP	12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	LOXL4	Q96JB6	756 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ERGIC2	Q96RQ1	377 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	DDX50	Q9BQ39	737 aa	Known RBP	12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	POPDC2	Q9HBU9	364 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ST7	Q9NRC1	585 aa		12.84	□□□□□ -0.35

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