RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 MDM4O15151 490 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 AXIN1O15169 862 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 EPHB6O15197 1021 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 BPIFB4P59827 614 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 MEA1Q16626 185 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 EML3Q32P44 896 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 TADA2BQ86TJ2 420 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 SYNPOQ8N3V7 929 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 ZNF276Q8N554 614 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 NEK11Q8NG66 645 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 DDX1Q92499 740 aaKnown RBP18.83■□□□□ 0.6
CCDC61-201ENST00000536603 ERGIC2Q96RQ1 377 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 CDK5RAP1Q96SZ6 601 aaKnown RBP18.83■□□□□ 0.6
CCDC61-201ENST00000536603 KLF16Q9BXK1 252 aaPredicted RBP18.83■□□□□ 0.6
CCDC61-201ENST00000536603 NLRC4Q9NPP4 1024 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 C2orf42Q9NWW7 574 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 DNMT3LQ9UJW3 386 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 SH3BP1Q9Y3L3 701 aa18.83■□□□□ 0.6
CCDC61-201ENST00000536603 HELZP42694 1942 aaKnown RBP18.82■□□□□ 0.6
CCDC61-201ENST00000536603 YJEFN3A6XGL0 299 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 E7ENQ6 273 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 F8VZ95 297 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 TEX33O43247 280 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 IRF1P10914 325 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 KRT9P35527 623 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 DAOAP59103 153 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 CCINQ13939 588 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 BTBD8Q5XKL5 378 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 KLHDC10Q6PID8 442 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 BHLHA9Q7RTU4 235 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 WDR5BQ86VZ2 330 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 SCML4Q8N228 414 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 WBP2Q969T9 261 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 MIS12Q9H081 205 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 ARRDC1-AS1Q9H2J1 176 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 ECT2Q9H8V3 914 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 RTN4Q9NQC3 1192 aaKnown RBP18.82■□□□□ 0.6
CCDC61-201ENST00000536603 CYTH4Q9UIA0 394 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 PCDHGC3Q9UN70 934 aa18.82■□□□□ 0.6
CCDC61-201ENST00000536603 E2F8A0AVK6 867 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 AP5Z1O43299 807 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 CYP11B1P15538 503 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 PXNP49023 591 aaPredicted RBP18.81■□□□□ 0.6
CCDC61-201ENST00000536603 RPL34P49207 117 aaKnown RBP18.81■□□□□ 0.6
CCDC61-201ENST00000536603 TPM4P67936 248 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 EFEMP1Q12805 493 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 CCDC6Q16204 474 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 FILIP1LQ4L180 1135 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 BSPRYQ5W0U4 402 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 RSRC2Q7L4I2 434 aaKnown RBP18.81■□□□□ 0.6
CCDC61-201ENST00000536603 MIB1Q86YT6 1006 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 PASD1Q8IV76 773 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 SCUBE3Q8IX30 993 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 CPA6Q8N4T0 437 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 WDTC1Q8N5D0 677 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 KIAA1958Q8N8K9 716 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 CLEC4CQ8WTT0 213 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 STK32AQ8WU08 396 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 EDEM1Q92611 657 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 ATP2A3Q93084 1043 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 SLC4A5Q9BY07 1137 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 SLC8A2Q9UPR5 921 aa18.81■□□□□ 0.6
CCDC61-201ENST00000536603 GOLGA6L19H0YKK7 550 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 SLC9A3R1O14745 358 aaPredicted RBP18.8■□□□□ 0.6
CCDC61-201ENST00000536603 RPP40O75818 363 aaKnown RBP18.8■□□□□ 0.6
CCDC61-201ENST00000536603 FBXO21O94952 628 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 HOXA6P31267 233 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 HOXC13P31276 330 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 ACADSBP45954 432 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 SF3A2Q15428 464 aaKnown RBP18.8■□□□□ 0.6
CCDC61-201ENST00000536603 ADGRG2Q8IZP9 1017 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 IRGQQ8WZA9 623 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 NAP1L5Q96NT1 182 aaPredicted RBP18.8■□□□□ 0.6
CCDC61-201ENST00000536603 SPAG5Q96R06 1193 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 LHX5Q9H2C1 402 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 PDCL3Q9H2J4 239 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 ABCC13Q9NSE7 274 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 TBC1D14Q9P2M4 693 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 RASAL2Q9UJF2 1139 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 DAAM1Q9Y4D1 1078 aa18.8■□□□□ 0.6
CCDC61-201ENST00000536603 E5RJQ4 531 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 ATG13O75143 517 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 GFPT2O94808 682 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 NFATC1O95644 943 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 SERPINC1P01008 464 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 JAM2P57087 298 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 GOLGA8FQ08AF8 430 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 GOLGA8DPQ0D2H9 430 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 GRSF1Q12849 480 aaKnown RBP eCLIP18.79■□□□□ 0.6
CCDC61-201ENST00000536603 NR1H3Q13133 447 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 PDCLQ13371 301 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 TAF3Q5VWG9 929 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 CACNA2D4Q7Z3S7 1137 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 TMEM110Q86TL2 294 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 RNF139Q8WU17 664 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 GAB3Q8WWW8 586 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 MARCH2Q9P0N8 246 aa18.79■□□□□ 0.6
CCDC61-201ENST00000536603 CACNA1BQ00975 2339 aa18.78■□□□□ 0.6
CCDC61-201ENST00000536603 A0A1B0GTH6 734 aa18.78■□□□□ 0.6
CCDC61-201ENST00000536603 GREM1O60565 184 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms