RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 LTFP02788 710 aa23.56■■□□□ 1.36
HMGA2-206ENST00000536545 GOT1P17174 413 aa23.56■■□□□ 1.36
HMGA2-206ENST00000536545 BDNFP23560 247 aa23.56■■□□□ 1.36
HMGA2-206ENST00000536545 DEUP1Q05D60 604 aa23.56■■□□□ 1.36
HMGA2-206ENST00000536545 CTU1Q7Z7A3 348 aaKnown RBP23.56■■□□□ 1.36
HMGA2-206ENST00000536545 CDKL3Q8IVW4 592 aaPredicted RBP23.56■■□□□ 1.36
HMGA2-206ENST00000536545 FAM126BQ8IXS8 530 aa23.56■■□□□ 1.36
HMGA2-206ENST00000536545 THEM5Q8N1Q8 247 aa23.56■■□□□ 1.36
HMGA2-206ENST00000536545 SCML4Q8N228 414 aa23.56■■□□□ 1.36
HMGA2-206ENST00000536545 IRGQQ8WZA9 623 aa23.56■■□□□ 1.36
HMGA2-206ENST00000536545 SEZ6LQ9BYH1 1024 aa23.56■■□□□ 1.36
HMGA2-206ENST00000536545 TBC1D13Q9NVG8 400 aa23.56■■□□□ 1.36
HMGA2-206ENST00000536545 SAGE1Q9NXZ1 904 aa23.56■■□□□ 1.36
HMGA2-206ENST00000536545 TCRBV7S3A2A0A539 114 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 KCNN4O15554 427 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 RBL1P28749 1068 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 LSP1P33241 339 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 NR2C2P49116 596 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 TSPY1Q01534 308 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 SLC10A2Q12908 348 aaPredicted RBP23.55■■□□□ 1.36
HMGA2-206ENST00000536545 XRCC4Q13426 336 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 MAPRE1Q15691 268 aaKnown RBP23.55■■□□□ 1.36
HMGA2-206ENST00000536545 ZSCAN26Q16670 478 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 SLC7A14Q8TBB6 771 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 PGAP3Q96FM1 320 aaPredicted RBP23.55■■□□□ 1.36
HMGA2-206ENST00000536545 QKIQ96PU8 341 aaKnown RBP eCLIP23.55■■□□□ 1.364e-7■■■■□ 22.5
HMGA2-206ENST00000536545 SLC9A7Q96T83 725 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 CNOT10Q9H9A5 744 aaKnown RBP23.55■■□□□ 1.36
HMGA2-206ENST00000536545 PRDM16Q9HAZ2 1276 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 WDR6Q9NNW5 1121 aaKnown RBP23.55■■□□□ 1.36
HMGA2-206ENST00000536545 PNPLA8Q9NP80 782 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 E7ESA3 106 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 GOLGA8MH3BSY2 632 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 DNM1LO00429 736 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 NBNO60934 754 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 MAP3K6O95382 1288 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 IVLP07476 585 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 ARL4AP40617 200 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 ARL4CP56559 192 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 KCNJ11Q14654 390 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 STAT4Q14765 748 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 GPNMBQ14956 572 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 PM20D1Q6GTS8 502 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 SH3TC2Q8TF17 1288 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 RNF139Q8WU17 664 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 NTAN1Q96AB6 310 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 ARHGEF4Q9NR80 690 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 TMPRSS4Q9NRS4 437 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 TMEM161AQ9NX61 479 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 PAK5Q9P286 719 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 LGALS13Q9UHV8 139 aa23.55■■□□□ 1.36
HMGA2-206ENST00000536545 SYNJ2BP-COX16A0A087WUM0 186 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 A0A087WUV0 522 aaPredicted RBP23.54■■□□□ 1.36
HMGA2-206ENST00000536545 CAPN9O14815 690 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 COL6A1P12109 1028 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 MMP13P45452 471 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 AIF1P55008 147 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 BASP1P80723 227 aaKnown RBP23.54■■□□□ 1.36
HMGA2-206ENST00000536545 SCAPQ12770 1279 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 PDIA2Q13087 525 aaKnown RBP23.54■■□□□ 1.36
HMGA2-206ENST00000536545 NME3Q13232 169 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 SLC45A4Q5BKX6 768 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 ZBED8Q8IZ13 594 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 TAB3Q8N5C8 712 aaPredicted RBP23.54■■□□□ 1.36
HMGA2-206ENST00000536545 OLFM3Q96PB7 478 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 ETNK2Q9NVF9 386 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 RRN3Q9NYV6 651 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 COX16Q9P0S2 106 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 MFHAS1Q9Y4C4 1052 aa23.54■■□□□ 1.36
HMGA2-206ENST00000536545 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.54■■□□□ 1.36
HMGA2-206ENST00000536545 H3BRJ5 948 aa23.53■■□□□ 1.36
HMGA2-206ENST00000536545 AMPD1P23109 780 aa23.53■■□□□ 1.36
HMGA2-206ENST00000536545 YWHAHQ04917 246 aaPredicted RBP23.53■■□□□ 1.36
HMGA2-206ENST00000536545 BFSP2Q13515 415 aa23.53■■□□□ 1.36
HMGA2-206ENST00000536545 FNBP1LQ5T0N5 605 aa23.53■■□□□ 1.36
HMGA2-206ENST00000536545 WDR83Q9BRX9 315 aaKnown RBP23.53■■□□□ 1.36
HMGA2-206ENST00000536545 UNC93B1Q9H1C4 597 aa23.53■■□□□ 1.36
HMGA2-206ENST00000536545 EURLQ9NYK6 297 aa23.53■■□□□ 1.36
HMGA2-206ENST00000536545 DTLQ9NZJ0 730 aa23.53■■□□□ 1.36
HMGA2-206ENST00000536545 KANSL3Q9P2N6 904 aa23.53■■□□□ 1.36
HMGA2-206ENST00000536545 XPO7Q9UIA9 1087 aaKnown RBP23.53■■□□□ 1.36
HMGA2-206ENST00000536545 SF3B1O75533 1304 aaKnown RBP eCLIP23.53■■□□□ 1.36
HMGA2-206ENST00000536545 SRRM3A6NNA2 597 aaPredicted RBP23.52■■□□□ 1.36
HMGA2-206ENST00000536545 BANF1O75531 89 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 NCAM1P13591 858 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 MSS51Q4VC12 460 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 EFHC2Q5JST6 749 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 CCDC13Q8IYE1 715 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 ELAC1Q9H777 363 aaKnown RBP23.52■■□□□ 1.36
HMGA2-206ENST00000536545 CTNNAL1Q9UBT7 734 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 TRIM17Q9Y577 477 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 CHADO15335 359 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 RNASELQ05823 741 aaKnown RBP23.52■■□□□ 1.36
HMGA2-206ENST00000536545 DPYSQ14117 519 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 PLEKHG4Q58EX7 1191 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 ADAM32Q8TC27 787 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 ANLNQ9NQW6 1124 aa23.52■■□□□ 1.36
HMGA2-206ENST00000536545 ZMYND8Q9ULU4 1186 aaPredicted RBP23.52■■□□□ 1.36
HMGA2-206ENST00000536545 CLUHO75153 1309 aa23.51■■□□□ 1.35
HMGA2-206ENST00000536545 MFSD11O43934 449 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms