RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 CCDC194A0A1B0GVG4 234 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 RRN3P2A6NIE6 340 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 GOLIM4O00461 696 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 EXTL3O43909 919 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 OPHN1O60890 802 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 ECI2O75521 394 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 CFIP05156 583 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 TGFB3P10600 412 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 ENGP17813 658 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 POU3F2P20265 443 aaPredicted RBP4.46□□□□□ -1.7
YBX3-205ENST00000536107 GDI1P31150 447 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 NEDD9Q14511 834 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 KARSQ15046 597 aaKnown RBP4.46□□□□□ -1.7
YBX3-205ENST00000536107 DGKKQ5KSL6 1271 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 TANGO2Q6ICL3 276 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 ZNF662Q6ZS27 426 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 LARP4Q71RC2 724 aaKnown RBP eCLIP4.46□□□□□ -1.7
YBX3-205ENST00000536107 MARCH9Q86YJ5 346 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 RBM12BQ8IXT5 1001 aaKnown RBP4.46□□□□□ -1.7
YBX3-205ENST00000536107 ITFG1Q8TB96 612 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 CSGALNACT1Q8TDX6 532 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 HDAC7Q8WUI4 952 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 DCAF4Q8WV16 495 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 ING5Q8WYH8 240 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 CAMK1GQ96NX5 476 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 RPS6KC1Q96S38 1066 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 APOL6Q9BWW8 343 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 LGR4Q9BXB1 951 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 PLA2G2FQ9BZM2 168 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 SEMA4CQ9C0C4 833 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 BCL11AQ9H165 835 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 PXMP2Q9NR77 195 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 ERAP1Q9NZ08 941 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 COL20A1Q9P218 1284 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 DBNLQ9UJU6 430 aaKnown RBP4.46□□□□□ -1.7
YBX3-205ENST00000536107 SSX2IPQ9Y2D8 614 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 INPP5FQ9Y2H2 1132 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 NPFFR2Q9Y5X5 522 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 APC2O95996 2303 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 ACACAQ13085 2346 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 MIA3Q5JRA6 1907 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 LAMA1P25391 3075 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 FOCADQ5VW36 1801 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 PATJQ8NI35 1801 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 FRMPD4Q14CM0 1322 aa4.46□□□□□ -1.7
YBX3-205ENST00000536107 RALGAPA1Q6GYQ0 2036 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 FBN3Q75N90 2809 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 CCDC163A0A0D9SF12 145 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 TCRBV5S4A2TA0A5A2 114 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 MBLAC1A4D2B0 266 aaPredicted RBP4.45□□□□□ -1.7
YBX3-205ENST00000536107 FAM149AA5PLN7 773 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 ZNF263O14978 683 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 CCL16O15467 120 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 TGM5O43548 720 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 SH3BP5O60239 455 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 LTFP02788 710 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 APPP05067 770 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 GALTP07902 379 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 SLC3A2P08195 630 aaKnown RBP4.45□□□□□ -1.7
YBX3-205ENST00000536107 ELAVL4P26378 380 aaKnown RBP4.45□□□□□ -1.7
YBX3-205ENST00000536107 CCND2P30279 289 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 ZNF76P36508 570 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 TDO2P48775 406 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 RHDQ02161 417 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 SEMG2Q02383 582 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 LONRF3Q496Y0 759 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 PREPLQ4J6C6 727 aaPredicted RBP4.45□□□□□ -1.7
YBX3-205ENST00000536107 CCDC157Q569K6 752 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 C2orf27AQ580R0 203 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 RRP12Q5JTH9 1297 aaKnown RBP4.45□□□□□ -1.7
YBX3-205ENST00000536107 CLLU1OSQ5K130 101 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 PPM1LQ5SGD2 360 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 MARCH8Q5T0T0 291 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 LIN9Q5TKA1 542 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 HIST2H2BCQ6DN03 193 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 METTL7BQ6UX53 244 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 FAM43BQ6ZT52 329 aaPredicted RBP4.45□□□□□ -1.7
YBX3-205ENST00000536107 TOGARAM2Q6ZUX3 1019 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 MICALCLQ6ZW33 695 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 ECHDC2Q86YB7 292 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 NME8Q8N427 588 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 UHMK1Q8TAS1 419 aaKnown RBP4.45□□□□□ -1.7
YBX3-205ENST00000536107 TNPO1Q92973 898 aaKnown RBP4.45□□□□□ -1.7
YBX3-205ENST00000536107 PPP1R14AQ96A00 147 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 LENG9Q96B70 501 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 WBP1Q96G27 269 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 FAM193BQ96PV7 902 aaPredicted RBP4.45□□□□□ -1.7
YBX3-205ENST00000536107 MEIS3Q99687 375 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 JAM3Q9BX67 310 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 ZNF334Q9HCZ1 680 aaPredicted RBP4.45□□□□□ -1.7
YBX3-205ENST00000536107 FBXO10Q9UK96 956 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 MRPS23Q9Y3D9 190 aaKnown RBP4.45□□□□□ -1.7
YBX3-205ENST00000536107 TELO2Q9Y4R8 837 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 WDR19Q8NEZ3 1342 aa4.45□□□□□ -1.7
YBX3-205ENST00000536107 MYH7BA7E2Y1 1941 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 KIAA1671Q9BY89 1806 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 TSPY2A6NKD2 308 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 TBX1O43435 398 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 SLC26A4O43511 780 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms