RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 POU5F2Q8N7G0 328 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 FNIP1Q8TF40 1166 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 LPIN3Q9BQK8 851 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 B3GNT5Q9BYG0 378 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 POPDC2Q9HBU9 364 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 ADAMTS5Q9UNA0 930 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 PRR5-ARHGAP8B1AHC4 643 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 F7P08709 466 aaPredicted RBP20.02■□□□□ 0.8
CAPN1-226ENST00000533820 CYP3A5P20815 502 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 ARHGAP8P85298 464 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 WDR78Q5VTH9 848 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 UNC5AQ6ZN44 842 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 HOXC10Q9NYD6 342 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 RGPD3A6NKT7 1758 aaPredicted RBP20.02■□□□□ 0.8
CAPN1-226ENST00000533820 RGPD4Q7Z3J3 1758 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 IGKV6D-21A0A0A0MT36 114 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 SOWAHBA6NEL2 793 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 RFPL1O75677 317 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 METTL18O95568 372 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 ZNF143P52747 638 aaPredicted RBP20.01■□□□□ 0.79
CAPN1-226ENST00000533820 NDST1P52848 882 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 OAZ1P54368 228 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 MRPS35P82673 323 aaKnown RBP20.01■□□□□ 0.79
CAPN1-226ENST00000533820 SDCCAG8Q86SQ7 713 aaPredicted RBP20.01■□□□□ 0.79
CAPN1-226ENST00000533820 PGLYRP2Q96PD5 576 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 CEP41Q9BYV8 373 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 HNRNPCL1O60812 293 aaKnown RBP20.01■□□□□ 0.79
CAPN1-226ENST00000533820 TFDP2Q14188 446 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 PPFIBP2Q8ND30 876 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 SLX1AQ9BQ83 275 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 CNPY3Q9BT09 278 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 ETNK2Q9NVF9 386 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 BTBD7Q9P203 1132 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 TSPAN16Q9UKR8 245 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 ZCCHC18P0CG32 403 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 HIPK4Q8NE63 616 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 PCDH19Q8TAB3 1148 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 FAM172AQ8WUF8 416 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 MCRS1Q96EZ8 462 aa20.01■□□□□ 0.79
CAPN1-226ENST00000533820 STAG3L1P0CL83 205 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 SKIP12755 728 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 IL4RP24394 825 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 GBE1Q04446 702 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 EFCAB12Q6NXP0 572 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 PQLC3Q8N755 202 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 EFCAB3Q8N7B9 438 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 OPTNQ96CV9 577 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 KLC2Q9H0B6 622 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 PAK5Q9P286 719 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 EVPLQ92817 2033 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 SLC15A5A6NIM6 579 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 APOL1O14791 398 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 PFDN1O60925 122 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 DNAJC6O75061 913 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 CILPO75339 1184 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 RPL10AP62906 217 aaKnown RBP20■□□□□ 0.79
CAPN1-226ENST00000533820 DYNC1I2Q13409 638 aaKnown RBP20■□□□□ 0.79
CAPN1-226ENST00000533820 C1orf146Q5VVC0 180 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 RIPOR1Q6ZS17 1223 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 USP6NLQ92738 828 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 HPDLQ96IR7 371 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 TUBB6Q9BUF5 446 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 FRMD8P1Q9BZ68 369 aaPredicted RBP20■□□□□ 0.79
CAPN1-226ENST00000533820 PHF24Q9UPV7 400 aa20■□□□□ 0.79
CAPN1-226ENST00000533820 ARHGAP42A6NI28 874 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 C2CD4BA6NLJ0 364 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 ZBTB42B2RXF5 422 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 CHADO15335 359 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 MAP3K7O43318 606 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 B4GALT4O60513 344 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 TGDSO95455 350 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 C1QAP02745 245 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 KCNA4P22459 653 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 ADORA2AP29274 412 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 ICAM3P32942 547 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 MXD4Q14582 209 aaPredicted RBP19.99■□□□□ 0.79
CAPN1-226ENST00000533820 SURF1Q15526 300 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 RSPH3Q86UC2 560 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 CRLF3Q8IUI8 442 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 DEPDC1BQ8WUY9 529 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 ANKRD27Q96NW4 1050 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 KRT82Q9NSB4 513 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 MFHAS1Q9Y4C4 1052 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 ACKR2O00590 384 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 APOEP02649 317 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 CCDC14Q49A88 953 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 SPDYAQ5MJ70 313 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 FOXB2Q5VYV0 432 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 SCUBE1Q8IWY4 988 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 MIPOL1Q8TD10 442 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 SNRNP25Q9BV90 132 aaKnown RBP19.99■□□□□ 0.79
CAPN1-226ENST00000533820 BCO2Q9BYV7 579 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 PSME4Q14997 1843 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 HMX2A2RU54 273 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 INHBCP55103 352 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 SLC25A3Q00325 362 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 GJC2Q5T442 439 aaPredicted RBP19.99■□□□□ 0.79
CAPN1-226ENST00000533820 FAM136AQ96C01 138 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 CCDC124Q96CT7 223 aaKnown RBP19.99■□□□□ 0.79
CAPN1-226ENST00000533820 DHX35Q9H5Z1 703 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms