RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 BEND5Q7L4P6 421 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 KIAA2013Q8IYS2 634 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 TSTD1Q8NFU3 115 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 HHIPQ96QV1 700 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 DMXL1Q9Y485 3027 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 CEP250Q9BV73 2442 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 NEDD8-MDP1E9PL57 170 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 SART1O43290 800 aaKnown RBP23.3■■□□□ 1.32
BEST1-207ENST00000533521 GABBR2O75899 941 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 CORO1AP31146 461 aaKnown RBP23.3■■□□□ 1.32
BEST1-207ENST00000533521 GPD2P43304 727 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 ACADSBP45954 432 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 MTIF2P46199 727 aaKnown RBP23.3■■□□□ 1.32
BEST1-207ENST00000533521 SEC13P55735 322 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 SRSF5Q13243 272 aaKnown RBP23.3■■□□□ 1.32
BEST1-207ENST00000533521 E2F5Q15329 346 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 FAM160A2Q8N612 972 aaPredicted RBP23.3■■□□□ 1.32
BEST1-207ENST00000533521 NAT16Q8N8M0 369 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 DNAJC17Q9NVM6 304 aaKnown RBP23.3■■□□□ 1.32
BEST1-207ENST00000533521 STOML2Q9UJZ1 356 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 AGO1Q9UL18 857 aaKnown RBP23.3■■□□□ 1.32
BEST1-207ENST00000533521 SLC27A6Q9Y2P4 619 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 RALGAPA1Q6GYQ0 2036 aa23.3■■□□□ 1.32
BEST1-207ENST00000533521 SLC12A8A0AV02 714 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 PRR5-ARHGAP8B1AHC4 643 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 ALDH1A2O94788 518 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 CISD3P0C7P0 127 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 PON1P27169 355 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 HOXC13P31276 330 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 ARHGAP8P85298 464 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 LMNB2Q03252 620 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 KDSRQ06136 332 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.29■■□□□ 1.32
BEST1-207ENST00000533521 ALLCQ8N6M5 410 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 ZNF606Q8WXB4 792 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 SHC3Q92529 594 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 CRACR2AQ9BSW2 395 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 TRIM62Q9BVG3 475 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 SLC2A11Q9BYW1 496 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 POLMQ9NP87 494 aaPredicted RBP23.29■■□□□ 1.32
BEST1-207ENST00000533521 PCDHGA5Q9Y5G8 931 aa23.29■■□□□ 1.32
BEST1-207ENST00000533521 KLF8O95600 359 aaPredicted RBP23.28■■□□□ 1.32
BEST1-207ENST00000533521 KRT5P13647 590 aa23.28■■□□□ 1.32
BEST1-207ENST00000533521 SLC9A1P19634 815 aa23.28■■□□□ 1.32
BEST1-207ENST00000533521 TIE1P35590 1138 aa23.28■■□□□ 1.32
BEST1-207ENST00000533521 ID4P47928 161 aa23.28■■□□□ 1.32
BEST1-207ENST00000533521 PXNP49023 591 aaPredicted RBP23.28■■□□□ 1.32
BEST1-207ENST00000533521 HARS2P49590 506 aaKnown RBP23.28■■□□□ 1.32
BEST1-207ENST00000533521 RBM43Q6ZSC3 357 aaKnown RBP23.28■■□□□ 1.32
BEST1-207ENST00000533521 TPGS1Q6ZTW0 290 aa23.28■■□□□ 1.32
BEST1-207ENST00000533521 SFTPA1Q8IWL2 248 aa23.28■■□□□ 1.32
BEST1-207ENST00000533521 CCDC33Q8N5R6 958 aa23.28■■□□□ 1.32
BEST1-207ENST00000533521 TXNDC5Q8NBS9 432 aaKnown RBP23.28■■□□□ 1.32
BEST1-207ENST00000533521 NDRG1Q92597 394 aaKnown RBP23.28■■□□□ 1.32
BEST1-207ENST00000533521 POLR3BQ9NW08 1133 aaPredicted RBP23.28■■□□□ 1.32
BEST1-207ENST00000533521 PLXND1Q9Y4D7 1925 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 SGK1O00141 431 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 GFRA2O00451 464 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 NPC1O15118 1278 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 LTFP02788 710 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 CYBBP04839 570 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 LCP1P13796 627 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 HNRNPLP14866 589 aaKnown RBP eCLIP23.27■■□□□ 1.32
BEST1-207ENST00000533521 DGKGP49619 791 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 RING1Q06587 406 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 CSRP2Q16527 193 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 USP39Q53GS9 565 aaKnown RBP23.27■■□□□ 1.32
BEST1-207ENST00000533521 C10orf76Q5T2E6 689 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 FYB2Q5VWT5 728 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 TMEM92Q6UXU6 159 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 CREBRFQ8IUR6 639 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 DENND1CQ8IV53 801 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 FMNL3Q8IVF7 1028 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 ZNF513Q8N8E2 541 aaPredicted RBP23.27■■□□□ 1.32
BEST1-207ENST00000533521 OLIG1Q8TAK6 271 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 GOLGA1Q92805 767 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 AZIN2Q96A70 460 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 TUBGCP2Q9BSJ2 902 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 SLC4A5Q9BY07 1137 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 NDST4Q9H3R1 872 aa23.27■■□□□ 1.32
BEST1-207ENST00000533521 ADAM23O75077 832 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 IGLV3-27P01718 113 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 NTSR1P30989 418 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 RGS7P49802 495 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 FOXK2Q01167 660 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 NNTQ13423 1086 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 VWA3BQ502W6 1294 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 EMC10Q5UCC4 262 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 ERMP1Q7Z2K6 904 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 TMEM110Q86TL2 294 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 PARD6AQ9NPB6 346 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 DLL3Q9NYJ7 618 aa23.26■■□□□ 1.31
BEST1-207ENST00000533521 BECN2A8MW95 431 aa23.25■■□□□ 1.31
BEST1-207ENST00000533521 GOLGA6L22H0YM25 854 aa23.25■■□□□ 1.31
BEST1-207ENST00000533521 RHOBTB1O94844 696 aa23.25■■□□□ 1.31
BEST1-207ENST00000533521 LETM1O95202 739 aaPredicted RBP23.25■■□□□ 1.31
BEST1-207ENST00000533521 EPN2O95208 641 aa23.25■■□□□ 1.31
BEST1-207ENST00000533521 EEF1GP26641 437 aaKnown RBP23.25■■□□□ 1.31
BEST1-207ENST00000533521 GNA15P30679 374 aa23.25■■□□□ 1.31
BEST1-207ENST00000533521 LPAL2Q16609 132 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms