RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CACNG3O60359 315 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 ALDH1A2O94788 518 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 SLC9A1P19634 815 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 ERCC5P28715 1186 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-204ENST00000532550 DAOAP59103 153 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 SPEM2Q0P670 501 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 EXOC3L4Q17RC7 722 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 USP39Q53GS9 565 aaKnown RBP18.03■□□□□ 0.48
PHRF1-204ENST00000532550 TRIM65Q6PJ69 517 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 BHLHA9Q7RTU4 235 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 TRMT11Q7Z4G4 463 aaKnown RBP18.03■□□□□ 0.48
PHRF1-204ENST00000532550 FMNL3Q8IVF7 1028 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 TERB1Q8NA31 727 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 IRGQQ8WZA9 623 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 GOLGA1Q92805 767 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 BHMTQ93088 406 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 PLD4Q96BZ4 506 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 GBP4Q96PP9 640 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 POLMQ9NP87 494 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-204ENST00000532550 PLK2Q9NYY3 685 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 AGO1Q9UL18 857 aaKnown RBP18.03■□□□□ 0.48
PHRF1-204ENST00000532550 GTPBP10A4D1E9 387 aaKnown RBP18.02■□□□□ 0.48
PHRF1-204ENST00000532550 SGK1O00141 431 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 TRIM24O15164 1050 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 LRP3O75074 770 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 CYBBP04839 570 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 USP8P40818 1118 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 HARS2P49590 506 aaKnown RBP18.02■□□□□ 0.48
PHRF1-204ENST00000532550 DGKGP49619 791 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 ARHGAP44Q17R89 818 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 DPCR1Q3MIW9 517 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 SDE2Q6IQ49 451 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 ANO7Q6IWH7 933 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 TMEM92Q6UXU6 159 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 KBTBD6Q86V97 674 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 ZNF513Q8N8E2 541 aaPredicted RBP18.02■□□□□ 0.48
PHRF1-204ENST00000532550 LOXL4Q96JB6 756 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 ZDHHC4Q9NPG8 344 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 ST7Q9NRC1 585 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 SFMBT1Q9UHJ3 866 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 STARD13Q9Y3M8 1113 aa18.02■□□□□ 0.48
PHRF1-204ENST00000532550 HBS1LQ9Y450 684 aaKnown RBP18.02■□□□□ 0.48
PHRF1-204ENST00000532550 FBXO21O94952 628 aa18.01■□□□□ 0.47
PHRF1-204ENST00000532550 LETM1O95202 739 aaPredicted RBP18.01■□□□□ 0.47
PHRF1-204ENST00000532550 TGM1P22735 817 aa18.01■□□□□ 0.47
PHRF1-204ENST00000532550 TRIP4Q15650 581 aaPredicted RBP18.01■□□□□ 0.47
PHRF1-204ENST00000532550 MAN2A1Q16706 1144 aa18.01■□□□□ 0.47
PHRF1-204ENST00000532550 CT47A1Q5JQC4 288 aaPredicted RBP18.01■□□□□ 0.47
PHRF1-204ENST00000532550 GJB7Q6PEY0 223 aa18.01■□□□□ 0.47
PHRF1-204ENST00000532550 ZNF606Q8WXB4 792 aa18.01■□□□□ 0.47
PHRF1-204ENST00000532550 ZC3H10Q96K80 434 aaKnown RBP18.01■□□□□ 0.47
PHRF1-204ENST00000532550 MIS12Q9H081 205 aa18.01■□□□□ 0.47
PHRF1-204ENST00000532550 APEX2Q9UBZ4 518 aa18.01■□□□□ 0.47
PHRF1-204ENST00000532550 CEP250Q9BV73 2442 aa18.01■□□□□ 0.47
PHRF1-204ENST00000532550 EML5Q05BV3 1969 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 PRR5-ARHGAP8B1AHC4 643 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 THAP12O43422 761 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 GABBR2O75899 941 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 RHOBTB1O94844 696 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 CISD3P0C7P0 127 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 PRKCSHP14314 528 aaPredicted RBP18■□□□□ 0.47
PHRF1-204ENST00000532550 SDHBP21912 280 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 PON1P27169 355 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 GNA15P30679 374 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 GPD2P43304 727 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 ACADSBP45954 432 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 ARHGAP8P85298 464 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 LMNB2Q03252 620 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 RASSF3Q86WH2 238 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 SCUBE3Q8IX30 993 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 CPXM2Q8N436 756 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 DDI1Q8WTU0 396 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 RMDN1Q96DB5 314 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 TPSD1Q9BZJ3 242 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 PARD6AQ9NPB6 346 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 SEMA4GQ9NTN9 838 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 BCCIPQ9P287 314 aaKnown RBP eCLIP18■□□□□ 0.47
PHRF1-204ENST00000532550 FBXO10Q9UK96 956 aa18■□□□□ 0.47
PHRF1-204ENST00000532550 GOLGA6L22H0YM25 854 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 DCLK1O15075 740 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 ADAM23O75077 832 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 PENKP01210 267 aaPredicted RBP17.99■□□□□ 0.47
PHRF1-204ENST00000532550 LTFP02788 710 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 NTSR1P30989 418 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 GBP1P32455 592 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 ELF2Q15723 593 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 CSRP2Q16527 193 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 RSPO4Q2I0M5 234 aaPredicted RBP17.99■□□□□ 0.47
PHRF1-204ENST00000532550 PLK5Q496M5 336 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 VWA3BQ502W6 1294 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 HSP90AA4PQ58FG1 418 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 FYB2Q5VWT5 728 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 DENND1BQ6P3S1 775 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 TOGARAM2Q6ZUX3 1019 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 C11orf74Q86VG3 221 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 CHPFQ8IZ52 775 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 PGBD3Q8N328 593 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 MDGA1Q8NFP4 955 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 CLEC4CQ8WTT0 213 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 STK32AQ8WU08 396 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms