RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 EPS15L1Q9UBC2 864 aa6.14□□□□□ -1.43
HMGB1P42-201ENST00000532126 ARMCX3Q9UH62 379 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P42-201ENST00000532126 MUTYHQ9UIF7 546 aa6.14□□□□□ -1.43
HMGB1P42-201ENST00000532126 KLF15Q9UIH9 416 aa6.14□□□□□ -1.43
HMGB1P42-201ENST00000532126 GTF3C4Q9UKN8 822 aa6.14□□□□□ -1.43
HMGB1P42-201ENST00000532126 CDH9Q9ULB4 789 aa6.14□□□□□ -1.43
HMGB1P42-201ENST00000532126 CDH7Q9ULB5 785 aa6.14□□□□□ -1.43
HMGB1P42-201ENST00000532126 ZFP37Q9Y6Q3 630 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P42-201ENST00000532126 REV3LO60673 3130 aa6.14□□□□□ -1.43
HMGB1P42-201ENST00000532126 A0A1B0GTH6 734 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 A0A1W2PNR3 127 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 MYBPHLA2RUH7 354 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 N4BP1O75113 896 aaKnown RBP6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 ATP2C2O75185 946 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 FGFR1OPO95684 399 aaKnown RBP6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 FGF19O95750 216 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 GNA14O95837 355 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 MBD3O95983 291 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 HAPLN1P10915 354 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 PYGMP11217 842 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 MYL4P12829 197 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 LAMP2P13473 410 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 TYRP1P17643 537 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 PTPN1P18031 435 aaKnown RBP6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 NME2P22392 152 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 CYP2F1P24903 491 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 MSX1P28360 303 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 RAP1GAPP47736 663 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 CCT5P48643 541 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 CDH8P55286 799 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 GEMIN4P57678 1058 aaKnown RBP6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 PSMC1P62191 440 aaKnown RBP6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 RPL10AP62906 217 aaKnown RBP6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 NOP14P78316 857 aaKnown RBP6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 SLC7A5Q01650 507 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 CYP27A1Q02318 531 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 TAF12Q16514 161 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 SLC5A9Q2M3M2 681 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 CFAP221Q4G0U5 840 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 MDH1BQ5I0G3 518 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 FOXB2Q5VYV0 432 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 SPOPLQ6IQ16 392 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 FAM171BQ6P995 826 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 C1orf228Q6PIY5 440 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 SCARA5Q6ZMJ2 495 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 C4orf50Q6ZRC1 276 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 LHFPL2Q6ZUX7 228 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 LYSMD3Q7Z3D4 306 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 FRMD5Q7Z6J6 570 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 DNAJB7Q7Z6W7 309 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 CNPY4Q8N129 248 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 LINC00528Q8N1L1 170 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 FBXL13Q8NEE6 735 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 MYCBPAPQ8TBZ2 947 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 GPT2Q8TD30 523 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 ING5Q8WYH8 240 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 PSMG2Q969U7 264 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 SLC35C1Q96A29 364 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 MYLPFQ96A32 169 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 ELMO3Q96BJ8 720 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 FUBP3Q96I24 572 aaKnown RBP eCLIP6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 MYADMQ96S97 322 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 PKMYT1Q99640 499 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 C1QTNF1Q9BXJ1 281 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 SLC13A1Q9BZW2 595 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 DNAI2Q9GZS0 605 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 EPHX3Q9H6B9 360 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 KCNK12Q9HB15 430 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 TIMMDC1Q9NPL8 285 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 CRTAC1Q9NQ79 661 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 RAB20Q9NX57 234 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 ZFATQ9P243 1243 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 IGSF9Q9P2J2 1179 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 RWDD2AQ9UIY3 292 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 SORCS3Q9UPU3 1222 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 ASB3Q9Y575 518 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 PLXNA3P51805 1871 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 PDCD11Q14690 1871 aaKnown RBP6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 VWA8A3KMH1 1905 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 BRWD1Q9NSI6 2320 aa6.13□□□□□ -1.43
HMGB1P42-201ENST00000532126 A0A096LPE4 126 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 A0A1W2PPZ6 126 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 ANHXE9PGG2 379 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 OPA1O60313 960 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 DNAJC8O75937 253 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 ASGR2P07307 311 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 CCDC192P0DO97 292 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 VCANP13611 3396 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 ANK1P16157 1881 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 ATF6P18850 670 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 TRIM21P19474 475 aaKnown RBP6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 GRNP28799 593 aaKnown RBP6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 ASPAP45381 313 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 GRIA4P48058 902 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 EPHA5P54756 1037 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 NLRP12P59046 1061 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 ZXDAP98168 799 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 CETN1Q12798 172 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 HYAL2Q12891 473 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 TDGQ13569 410 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms