RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 IL9RQ01113 521 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 AMPD3Q01432 767 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 C19orf57Q0VDD7 668 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 NCOA4Q13772 614 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 GEN1Q17RS7 908 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 KIF19Q2TAC6 998 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 ADAT2Q7Z6V5 191 aaKnown RBP9.73□□□□□ -0.85
NEDD8-206ENST00000531430 FUKQ8N0W3 1084 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 GALNT15Q8N3T1 639 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 ZMIZ2Q8NF64 920 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 CADM4Q8NFZ8 388 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 ZNF507Q8TCN5 953 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 GANCQ8TET4 914 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 SORCS1Q8WY21 1168 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 SDCBP2Q9H190 292 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 NMUR1Q9HB89 426 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 IL37Q9NZH6 218 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 RASAL2Q9UJF2 1139 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 DNMT3LQ9UJW3 386 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 BTBD3Q9Y2F9 522 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 SNX11Q9Y5W9 270 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 PCDH15Q96QU1 1955 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 SETXQ7Z333 2677 aaKnown RBP9.73□□□□□ -0.85
NEDD8-206ENST00000531430 BPTFQ12830 3046 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 PLXND1Q9Y4D7 1925 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 FLRT2O43155 660 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 TGFB1I1O43294 461 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 CYBBP04839 570 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 RALAP11233 206 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 JUPP14923 745 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 BNC1Q01954 994 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 EFEMP1Q12805 493 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 ZNF234Q14588 700 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 STK38Q15208 465 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 TEAD4Q15561 434 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 FAM26FQ5R3K3 315 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 PRAMEF14Q5SWL7 426 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 DHRS13Q6UX07 377 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 SERPINA13PQ6UXR4 307 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 GPRIN1Q7Z2K8 1008 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 GLRX5Q86SX6 157 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 METTL3Q86U44 580 aaKnown RBP9.72□□□□□ -0.85
NEDD8-206ENST00000531430 PDCD7Q8N8D1 485 aaKnown RBP9.72□□□□□ -0.85
NEDD8-206ENST00000531430 ENGASEQ8NFI3 743 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 DDI1Q8WTU0 396 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 CYFIP2Q96F07 1278 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 XYLT2Q9H1B5 865 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 BLZF1Q9H2G9 400 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 CD248Q9HCU0 757 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 SLC39A2Q9NP94 309 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 FOXD4L1Q9NU39 408 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 OSER1Q9NX31 292 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 ELOVL2Q9NXB9 296 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 MARK1Q9P0L2 795 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 THAP10Q9P2Z0 257 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-206ENST00000531430 AK5Q9Y6K8 562 aa9.72□□□□□ -0.85
NEDD8-206ENST00000531430 LAMA5O15230 3695 aa9.71□□□□□ -0.85
NEDD8-206ENST00000531430 CABIN1Q9Y6J0 2220 aa9.71□□□□□ -0.85
NEDD8-206ENST00000531430 FAM47DPA6NHR8 397 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 EIF3DO15371 548 aaKnown RBP eCLIP9.71□□□□□ -0.86
NEDD8-206ENST00000531430 GREM1O60565 184 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 TSPAN3O60637 253 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 STAU1O95793 577 aaKnown RBP9.71□□□□□ -0.86
NEDD8-206ENST00000531430 HLA-EP13747 358 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 PDCP20941 246 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 CASP1P29466 404 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 CHKAP35790 457 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 ABCG1P45844 678 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 AFF3P51826 1226 aaKnown RBP9.71□□□□□ -0.86
NEDD8-206ENST00000531430 MFAP3P55082 362 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 SEMG2Q02383 582 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 SGSM1Q2NKQ1 1148 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 FNDC3BQ53EP0 1204 aaKnown RBP9.71□□□□□ -0.86
NEDD8-206ENST00000531430 SPOPLQ6IQ16 392 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 LAYNQ6UX15 382 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 LRRC69Q6ZNQ3 347 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 TADA2BQ86TJ2 420 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 DENND1CQ8IV53 801 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 USP28Q96RU2 1077 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 TNMDQ9H2S6 317 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 C6orf106Q9H6K1 298 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-206ENST00000531430 UPF2Q9HAU5 1272 aaKnown RBP9.71□□□□□ -0.86
NEDD8-206ENST00000531430 SCUBE2Q9NQ36 999 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 TOR4AQ9NXH8 423 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 USP36Q9P275 1121 aaKnown RBP9.71□□□□□ -0.86
NEDD8-206ENST00000531430 TFIP11Q9UBB9 837 aaKnown RBP9.71□□□□□ -0.86
NEDD8-206ENST00000531430 HMGXB4Q9UGU5 601 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 PLA2G4CQ9UP65 541 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 SCML2Q9UQR0 700 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 ANKRD6Q9Y2G4 727 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 ZNF510Q9Y2H8 683 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 FLNBO75369 2602 aaKnown RBP9.71□□□□□ -0.86
NEDD8-206ENST00000531430 SHROOM3Q8TF72 1996 aa9.71□□□□□ -0.86
NEDD8-206ENST00000531430 KNTC1P50748 2209 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 SLC12A8A0AV02 714 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 FAM92AA1XBS5 289 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 LRRIQ3A6PVS8 624 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-206ENST00000531430 H0Y8X5 98 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 PLK4O00444 970 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 TNFSF14O43557 240 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms