RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TKTL1P51854 596 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 SLC8A3P57103 927 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 YWHAGP61981 247 aaKnown RBP eCLIP16.56■□□□□ 0.24
CPSF1-205ENST00000531042 IRX4P78413 519 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 LRRC63Q05C16 580 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 CUL2Q13617 745 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 PM20D1Q6GTS8 502 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 ARMCX6Q7L4S7 300 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 SYT12Q8IV01 421 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 CHPFQ8IZ52 775 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 IPO4Q8TEX9 1081 aaKnown RBP16.56■□□□□ 0.24
CPSF1-205ENST00000531042 SMARCE1Q969G3 411 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 TIGD1Q96MW7 591 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 GABRG3Q99928 467 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 GTPBP4Q9BZE4 634 aaKnown RBP16.56■□□□□ 0.24
CPSF1-205ENST00000531042 TMEM9BQ9NQ34 198 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 TMEM74BQ9NUR3 256 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 CALCOCO1Q9P1Z2 691 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 ARMCX3Q9UH62 379 aaPredicted RBP16.56■□□□□ 0.24
CPSF1-205ENST00000531042 EVLQ9UI08 416 aaPredicted RBP16.56■□□□□ 0.24
CPSF1-205ENST00000531042 TPRP12270 2363 aaKnown RBP16.56■□□□□ 0.24
CPSF1-205ENST00000531042 KMT2BQ9UMN6 2715 aaPredicted RBP16.55■□□□□ 0.24
CPSF1-205ENST00000531042 EPG5Q9HCE0 2579 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 TULP2O00295 520 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 CDX4O14627 284 aaPredicted RBP16.55■□□□□ 0.24
CPSF1-205ENST00000531042 ZBED1O96006 694 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 PENKP01210 267 aaPredicted RBP16.55■□□□□ 0.24
CPSF1-205ENST00000531042 PMLP29590 882 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 CORO1AP31146 461 aaKnown RBP16.55■□□□□ 0.24
CPSF1-205ENST00000531042 CHKAP35790 457 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 NUCB2P80303 420 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 GOLGA7BQ2TAP0 167 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 SGO2Q562F6 1265 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 DAB2IPQ5VWQ8 1189 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 FYB2Q5VWT5 728 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 LYSMD4Q5XG99 296 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 KIAA1211LQ6NV74 962 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 SLC35C1Q96A29 364 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 MARCH2Q9P0N8 246 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 TSPAN16Q9UKR8 245 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 AGO1Q9UL18 857 aaKnown RBP16.55■□□□□ 0.24
CPSF1-205ENST00000531042 CHD8Q9HCK8 2581 aa16.55■□□□□ 0.24
CPSF1-205ENST00000531042 GFRA2O00451 464 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 XPO1O14980 1071 aaKnown RBP16.54■□□□□ 0.24
CPSF1-205ENST00000531042 ZBTB24O43167 697 aaPredicted RBP16.54■□□□□ 0.24
CPSF1-205ENST00000531042 AP5Z1O43299 807 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 NDUFV2P19404 249 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 DPP6P42658 865 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 BCAT1P54687 386 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 YWHAEP62258 255 aaKnown RBP16.54■□□□□ 0.24
CPSF1-205ENST00000531042 PDE4CQ08493 712 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 BECN1Q14457 450 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 TRIM61Q5EBN2 209 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 PEAR1Q5VY43 1037 aaPredicted RBP16.54■□□□□ 0.24
CPSF1-205ENST00000531042 PSAPL1Q6NUJ1 521 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 SLC36A4Q6YBV0 504 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 RSRC2Q7L4I2 434 aaKnown RBP16.54■□□□□ 0.24
CPSF1-205ENST00000531042 BHLHA9Q7RTU4 235 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 UBR7Q8N806 425 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 NDRG1Q92597 394 aaKnown RBP16.54■□□□□ 0.24
CPSF1-205ENST00000531042 ERLEC1Q96DZ1 483 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 ULBP1Q9BZM6 244 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 CACNA2D2Q9NY47 1150 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 HESX1Q9UBX0 185 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 HOOK1Q9UJC3 728 aaKnown RBP16.54■□□□□ 0.24
CPSF1-205ENST00000531042 PILRBQ9UKJ0 227 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 STRIP2Q9ULQ0 834 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 SLC27A6Q9Y2P4 619 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 RAD54BQ9Y620 910 aa16.54■□□□□ 0.24
CPSF1-205ENST00000531042 IGHV1OR15-9A0A0B4J2B8 117 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 SLC12A8A0AV02 714 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 WASH3PC4AMC7 463 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 ZNF217O75362 1048 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 VDRP11473 427 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 CD19P15391 556 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 ITPKAP23677 461 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 MFAP3P55082 362 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 RPL6Q02878 288 aaKnown RBP16.53■□□□□ 0.24
CPSF1-205ENST00000531042 BST2Q10589 180 aaKnown RBP16.53■□□□□ 0.24
CPSF1-205ENST00000531042 LMAN2Q12907 356 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 LRMPQ12912 555 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 SLC23A3Q6PIS1 610 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 DENND1CQ8IV53 801 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 CPXM2Q8N436 756 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 NUSAP1Q9BXS6 441 aaKnown RBP16.53■□□□□ 0.24
CPSF1-205ENST00000531042 METTL14Q9HCE5 456 aaKnown RBP16.53■□□□□ 0.24
CPSF1-205ENST00000531042 ANGPTL2Q9UKU9 493 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 KIAA1257Q9ULG3 409 aa16.53■□□□□ 0.24
CPSF1-205ENST00000531042 ATXN2Q99700 1313 aaKnown RBP16.52■□□□□ 0.24
CPSF1-205ENST00000531042 PSMA7O14818 248 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 CYBBP04839 570 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 TBXAS1P24557 533 aaPredicted RBP16.52■□□□□ 0.24
CPSF1-205ENST00000531042 HOXD12P35452 270 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 FMO5P49326 533 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 NOVA1P51513 510 aaKnown RBP16.52■□□□□ 0.24
CPSF1-205ENST00000531042 SHC2P98077 582 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 STIM1Q13586 685 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 GEN1Q17RS7 908 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 ISM2Q6H9L7 571 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 FAM217AQ8IXS0 508 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms