RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 TMPRSS9Q7Z410 1059 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 KDELC2Q7Z4H8 507 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 SLC15A3Q8IY34 581 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 CCDC105Q8IYK2 499 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 ULK2Q8IYT8 1036 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 CHCHD4Q8N4Q1 142 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 ZNF713Q8N859 430 aaPredicted RBP3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 RNF169Q8NCN4 708 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 ZNF483Q8TF39 744 aaPredicted RBP3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 TMEM171Q8WVE6 324 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 SH3KBP1Q96B97 665 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 ELP4Q96EB1 424 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 MASTLQ96GX5 879 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 PHACTR3Q96KR7 559 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 ZNF512Q96ME7 567 aaPredicted RBP3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 FMNL2Q96PY5 1086 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 PNKPQ96T60 521 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 SIL1Q9H173 461 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 OR10A4Q9H209 315 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 SERHL2Q9H4I8 314 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 SPON1Q9HCB6 807 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 CCDC177Q9NQR7 707 aaPredicted RBP3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 BEX4Q9NWD9 120 aaPredicted RBP3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 HCN3Q9P1Z3 774 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 CTTNBP2NLQ9P2B4 639 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 ZDHHC9Q9Y397 364 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 NEU2Q9Y3R4 380 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 NR2E1Q9Y466 385 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 PMF1-BGLAPU3KQ54 211 aa3.87□□□□□ -1.79
AMBRA1-208ENST00000529558 TEX51A0A1B0GUA7 166 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 FAM181BA6NEQ2 426 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 MBD3L5A6NJ08 208 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 TMEM232C9JQI7 657 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 E7ENX8 843 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 M0QYT0 321 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 MATN2O00339 956 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 SH2B2O14492 632 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 ADAMTS4O75173 837 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 SUN1O94901 812 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 WDR47O94967 919 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 CYP1A1P04798 512 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 ACP5P13686 325 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 ALADP13716 330 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 ITGALP20701 1170 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 GLDCP23378 1020 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 YY1P25490 414 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 NFKBIAP25963 317 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 MGAT1P26572 445 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 CALRP27797 417 aaKnown RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 PPIFP30405 207 aaKnown RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 THBS4P35443 961 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 BSGP35613 385 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 PBX1P40424 430 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 DPP6P42658 865 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 GSTM5P46439 218 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 PDE6CP51160 858 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 AFF3P51826 1226 aaKnown RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 CHN2P52757 468 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 EPHB3P54753 998 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 SNX16P57768 344 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 FAM3BP58499 235 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 TIRAPP58753 221 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 TAP2Q03519 686 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 DLX2Q07687 328 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 LRMPQ12912 555 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 MTAPQ13126 283 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 THOC5Q13769 683 aaKnown RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 SCARB2Q14108 478 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 AAK1Q2M2I8 961 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 CCDC92Q53HC0 331 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 ZNF766Q5HY98 468 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 ARHGAP40Q5TG30 622 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 FAM90A2PQ658T7 463 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 NUGGCQ68CJ6 796 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 SFRP4Q6FHJ7 346 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 TMEM132EQ6IEE7 984 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 RGS7BPQ6MZT1 257 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 CCDC144NLQ6NUI1 221 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 FAM111BQ6SJ93 734 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 CYP20A1Q6UW02 462 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 GALNTL5Q7Z4T8 443 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 ATG4DQ86TL0 474 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 ZNF366Q8N895 744 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 C11orf44Q8N8P7 122 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 KCTD6Q8NC69 237 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 AFAP1L1Q8TED9 768 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 SCFD2Q8WU76 684 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 OVCA2Q8WZ82 227 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 SPATA17Q96L03 361 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 HAPLN3Q96S86 360 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 CD180Q99467 661 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 CPPED1Q9BRF8 314 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 FTOQ9C0B1 505 aaKnown RBP eCLIP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 MCOLN1Q9GZU1 580 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 NRDE2Q9H7Z3 1164 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 ZWILCHQ9H900 591 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 AGO3Q9H9G7 860 aaKnown RBP3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 KCNK9Q9NPC2 374 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 PCDHB16Q9NRJ7 776 aa3.86□□□□□ -1.79
AMBRA1-208ENST00000529558 RXFP3Q9NSD7 469 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms