RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 GMIPQ9P107 970 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 PCDHB3Q9Y5E6 796 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 PCDHGB2Q9Y5G2 931 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 STON1Q9Y6Q2 735 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 SETXQ7Z333 2677 aaKnown RBP9.49□□□□□ -0.89
VPS11-203ENST00000529545 FRMD3A2A2Y4 597 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 METTL12A8MUP2 240 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 WASH3PC4AMC7 463 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 AP1G2O75843 785 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 ZIC2O95409 532 aaPredicted RBP9.49□□□□□ -0.89
VPS11-203ENST00000529545 CST3P01034 146 aaPredicted RBP9.49□□□□□ -0.89
VPS11-203ENST00000529545 ATXN1LP0C7T5 689 aaKnown RBP9.49□□□□□ -0.89
VPS11-203ENST00000529545 ZDHHC11BP0C7U3 371 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 TRIM21P19474 475 aaKnown RBP9.49□□□□□ -0.89
VPS11-203ENST00000529545 ATICP31939 592 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 ATP5C1P36542 298 aaKnown RBP9.49□□□□□ -0.89
VPS11-203ENST00000529545 STAT6P42226 847 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 ABCG1P45844 678 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 TPMTP51580 245 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 RABEP1Q15276 862 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 SNRNP35Q16560 246 aaKnown RBP9.49□□□□□ -0.89
VPS11-203ENST00000529545 FUT11Q495W5 492 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 USP49Q70CQ1 688 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 FAM35AQ86V20 835 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 BHMTQ93088 406 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 WBP2Q969T9 261 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 SIPA1Q96FS4 1042 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 CGRRF1Q99675 332 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 LRRC27Q9C0I9 530 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 IL21RQ9HBE5 538 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 CD93Q9NPY3 652 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 KRT82Q9NSB4 513 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 USP36Q9P275 1121 aaKnown RBP9.49□□□□□ -0.89
VPS11-203ENST00000529545 EIF2B4Q9UI10 523 aaKnown RBP9.49□□□□□ -0.89
VPS11-203ENST00000529545 FNDC3AQ9Y2H6 1198 aaKnown RBP9.49□□□□□ -0.89
VPS11-203ENST00000529545 NME7Q9Y5B8 376 aa9.49□□□□□ -0.89
VPS11-203ENST00000529545 URB1O60287 2271 aaKnown RBP9.49□□□□□ -0.89
VPS11-203ENST00000529545 WDFY3Q8IZQ1 3526 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 MYH10P35580 1976 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 APC2O95996 2303 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 FREM2Q5SZK8 3169 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 A0A087WV48 116 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 FAM92AA1XBS5 289 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 E9PAM4 449 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 TNFSF14O43557 240 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 ACTN4O43707 911 aaKnown RBP9.48□□□□□ -0.89
VPS11-203ENST00000529545 STAU1O95793 577 aaKnown RBP9.48□□□□□ -0.89
VPS11-203ENST00000529545 PLA2G4AP47712 749 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 AFF3P51826 1226 aaKnown RBP9.48□□□□□ -0.89
VPS11-203ENST00000529545 CDH8P55286 799 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 MYL6P60660 151 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 ARID5AQ03989 594 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 PSMD6Q15008 389 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 INAVAQ3KP66 663 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 CCDC157Q569K6 752 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 ZNF667Q5HYK9 610 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 DBX2Q6ZNG2 339 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 TADA2BQ86TJ2 420 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 TMPRSS6Q8IU80 811 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 BAHD1Q8TBE0 780 aaPredicted RBP9.48□□□□□ -0.89
VPS11-203ENST00000529545 SNX19Q92543 992 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 TMX3Q96JJ7 454 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 KLF16Q9BXK1 252 aaPredicted RBP9.48□□□□□ -0.89
VPS11-203ENST00000529545 FGFBP2Q9BYJ0 223 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 PANK2Q9BZ23 570 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 PCED1AQ9H1Q7 454 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 DNMT3LQ9UJW3 386 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.48□□□□□ -0.89
VPS11-203ENST00000529545 ZNF510Q9Y2H8 683 aa9.48□□□□□ -0.89
VPS11-203ENST00000529545 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.48□□□□□ -0.89
VPS11-203ENST00000529545 SRPRBQ9Y5M8 271 aaKnown RBP9.48□□□□□ -0.89
VPS11-203ENST00000529545 SHROOM3Q8TF72 1996 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 A0A1B0GVT2 93 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 FAM149AA5PLN7 773 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 EIF3DO15371 548 aaKnown RBP eCLIP9.47□□□□□ -0.89
VPS11-203ENST00000529545 DKK1O94907 266 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 TBX18O95935 607 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 CISD3P0C7P0 127 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 P4HA1P13674 534 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 HLA-EP13747 358 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 FECHP22830 423 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 CHKAP35790 457 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 GGCXP38435 758 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 GRK6P43250 576 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 CSNK1EP49674 416 aaKnown RBP9.47□□□□□ -0.89
VPS11-203ENST00000529545 CYP2J2P51589 502 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 COPS2P61201 443 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 CYP24A1Q07973 514 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 BIRC3Q13489 604 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 ZNF699Q32M78 642 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 LRRC69Q6ZNQ3 347 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 ACOT1Q86TX2 421 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 FUKQ8N0W3 1084 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 XXYLT1Q8NBI6 393 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 ADAM32Q8TC27 787 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 MKRN2Q9H000 416 aaKnown RBP9.47□□□□□ -0.89
VPS11-203ENST00000529545 CYLDQ9NQC7 956 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 TOR4AQ9NXH8 423 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 PLK2Q9NYY3 685 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 THAP10Q9P2Z0 257 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms