RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	PAX7	P23759	505 aa		24.22	■■□□□ 1.47
GSDMD-208	ENST00000528475	CNTF	P26441	200 aa		24.22	■■□□□ 1.47
GSDMD-208	ENST00000528475	IGBP1	P78318	339 aa		24.22	■■□□□ 1.47
GSDMD-208	ENST00000528475	HSF5	Q4G112	596 aa	Predicted RBP	24.22	■■□□□ 1.47
GSDMD-208	ENST00000528475	NUDCD3	Q8IVD9	361 aa		24.22	■■□□□ 1.47
GSDMD-208	ENST00000528475	C11orf84	Q9BUA3	381 aa	Predicted RBP	24.22	■■□□□ 1.47
GSDMD-208	ENST00000528475	MECR	Q9BV79	373 aa		24.22	■■□□□ 1.47
GSDMD-208	ENST00000528475	PAPSS1	O43252	624 aa	Predicted RBP	24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	UGT1A9	O60656	530 aa		24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	ECM2	O94769	699 aa	Predicted RBP	24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	SEMA5A	Q13591	1074 aa		24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	KPNB1	Q14974	876 aa	Known RBP	24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	CHI3L2	Q15782	390 aa		24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	STXBP5	Q5T5C0	1151 aa		24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	ANO7	Q6IWH7	933 aa		24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	ZNF333	Q96JL9	665 aa		24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	QKI	Q96PU8	341 aa	Known RBP eCLIP	24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	UGT1A7	Q9HAW7	530 aa		24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	UGT1A10	Q9HAW8	530 aa		24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	UGT1A8	Q9HAW9	530 aa		24.21	■■□□□ 1.47
GSDMD-208	ENST00000528475	COL1A2	P08123	1366 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	HMX2	A2RU54	273 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	PSMG1	O95456	288 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	BPGM	P07738	259 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	L1CAM	P32004	1257 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	BMPR2	Q13873	1038 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	TBCC	Q15814	346 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	CAPRIN2	Q6IMN6	1127 aa	Known RBP	24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	ARC	Q7LC44	396 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	ALYREF	Q86V81	257 aa	Known RBP	24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	TMPRSS6	Q8IU80	811 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	MICAL1	Q8TDZ2	1067 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	CENPI	Q92674	756 aa	Predicted RBP	24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	TXNRD2	Q9NNW7	524 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	MOCS1	Q9NZB8	636 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	ZFAT	Q9P243	1243 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	RBPJL	Q9UBG7	517 aa		24.2	■■□□□ 1.47
GSDMD-208	ENST00000528475	NVL	O15381	856 aa	Known RBP	24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	CDC25C	P30307	473 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	SCNN1A	P37088	669 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	GRM5	P41594	1212 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	RCN1	Q15293	331 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	CCDC6	Q16204	474 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	CES4A	Q5XG92	561 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	TRMT10B	Q6PF06	316 aa	Known RBP	24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	CRLF3	Q8IUI8	442 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	SMC1B	Q8NDV3	1235 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	KIF12	Q96FN5	646 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	OSBPL1A	Q9BXW6	950 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	SLC13A1	Q9BZW2	595 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	AKT3	Q9Y243	479 aa		24.2	■■□□□ 1.46
GSDMD-208	ENST00000528475	TSPAN1	O60635	241 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	GABBR2	O75899	941 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	LGALS2	P05162	132 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	MRPS35	P82673	323 aa	Known RBP	24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	SLC34A1	Q06495	639 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	ARHGAP1	Q07960	439 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	STEAP4	Q687X5	459 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	TRIM68	Q6AZZ1	485 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	ARID3B	Q8IVW6	561 aa	Predicted RBP	24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	SCUBE3	Q8IX30	993 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	MRPL45	Q9BRJ2	306 aa	Known RBP	24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	FAM167B	Q9BTA0	163 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	PDGFC	Q9NRA1	345 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	NMRK1	Q9NWW6	199 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	STX18	Q9P2W9	335 aa	Known RBP	24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	HESX1	Q9UBX0	185 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	DERA	Q9Y315	318 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	CXCL11	O14625	94 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	MAP3K6	O95382	1288 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	SLC10A2	Q12908	348 aa	Predicted RBP	24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475		Q3C1V9	767 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	PPP6R3	Q5H9R7	873 aa	Predicted RBP	24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	FAM182A	Q5T1J6	154 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	ARHGAP17	Q68EM7	881 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	KYAT3	Q6YP21	454 aa	Known RBP	24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	NDUFAF2	Q8N183	169 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	STKLD1	Q8NE28	680 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	PCMTD2	Q9NV79	361 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	MAD1L1	Q9Y6D9	718 aa		24.19	■■□□□ 1.46
GSDMD-208	ENST00000528475	POLR2A	P24928	1970 aa	Known RBP	24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	KRT36	O76013	467 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	ALDH1A2	O94788	518 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	MLN	P12872	115 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	PGM1	P36871	562 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	GBE1	Q04446	702 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	WASHC5	Q12768	1159 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	LAMC2	Q13753	1193 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	MUM1	Q2TAK8	710 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	ACOT1	Q86TX2	421 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	GPC2	Q8N158	579 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	MPP5	Q8N3R9	675 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	ACMSD	Q8TDX5	336 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	SPDL1	Q96EA4	605 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	SIKE1	Q9BRV8	207 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	ARMCX1	Q9P291	453 aa		24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	HBS1L	Q9Y450	684 aa	Known RBP	24.18	■■□□□ 1.46
GSDMD-208	ENST00000528475	MCM3AP	O60318	1980 aa		24.17	■■□□□ 1.46
GSDMD-208	ENST00000528475		A6NJR5	290 aa		24.17	■■□□□ 1.46
GSDMD-208	ENST00000528475		F8W8V4	182 aa		24.17	■■□□□ 1.46

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms