RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 SRGAP2CP0DJJ0 459 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 KRT10P13645 584 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 ATF2P15336 505 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 AKAP5P24588 427 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 MATKP42679 507 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CD97P48960 835 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 EPHB3P54753 998 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 FANCCQ00597 558 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 ROR1Q01973 937 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 MYL5Q02045 173 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 ZNF33AQ06730 810 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 PLD1Q13393 1074 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 DRP2Q13474 957 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CASP8Q14790 479 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 WHAMMP3Q1A5X7 153 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.36□□□□□ -1.71
CHD7-205ENST00000527825 DNAJC21Q5F1R6 531 aaKnown RBP4.36□□□□□ -1.71
CHD7-205ENST00000527825 UBXN11Q5T124 520 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 GPR158Q5T848 1215 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CWC27Q6UX04 472 aaKnown RBP4.36□□□□□ -1.71
CHD7-205ENST00000527825 DHRS13Q6UX07 377 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CATIPQ7Z7H3 387 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 KSR1Q8IVT5 923 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 ARMC10Q8N2F6 343 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 FBXL16Q8N461 479 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CPA6Q8N4T0 437 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CCDC33Q8N5R6 958 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 FSIP1Q8NA03 581 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 ZNF248Q8NDW4 579 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 NSUN7Q8NE18 718 aaKnown RBP4.36□□□□□ -1.71
CHD7-205ENST00000527825 CTCFLQ8NI51 663 aaPredicted RBP4.36□□□□□ -1.71
CHD7-205ENST00000527825 SHKBP1Q8TBC3 707 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 HMGB4Q8WW32 186 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 ZBTB9Q96C00 473 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 DHX58Q96C10 678 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 RSPRY1Q96DX4 576 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CHFRQ96EP1 664 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CCDC51Q96ER9 411 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 DRC1Q96MC2 740 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 USP28Q96RU2 1077 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 FNBP1Q96RU3 617 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 WDR24Q96S15 920 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 EIF2AQ9BY44 585 aaKnown RBP4.36□□□□□ -1.71
CHD7-205ENST00000527825 CSRNP2Q9H175 543 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 ATXN3LQ9H3M9 355 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 ACBD3Q9H3P7 528 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 EBF3Q9H4W6 596 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CPNE5Q9HCH3 593 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 PDE11AQ9HCR9 933 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 INTS13Q9NVM9 706 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CACNG4Q9UBN1 327 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CDC23Q9UJX2 597 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 COL4A3BPQ9Y5P4 624 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 BACE2Q9Y5Z0 518 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 CITO14578 2027 aa4.36□□□□□ -1.71
CHD7-205ENST00000527825 ANKRD17O75179 2603 aaKnown RBP4.36□□□□□ -1.71
CHD7-205ENST00000527825 TMCO5BA8MYB1 307 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 MEIS1O00470 390 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 DHX15O43143 795 aaKnown RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 TNFSF14O43557 240 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 MARCH6O60337 910 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 JAK2O60674 1132 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 CBFA2T3O75081 653 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 MOSPD3O75425 235 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 B3GAT3O94766 335 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 FSBPO95073 299 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 B3GALT4O96024 378 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 FOSP01100 380 aaPredicted RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 IGLV1-40P01703 118 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 THP07101 528 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 CALM1P0DP23 149 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 CALM2P0DP24 149 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 CALM3P0DP25 149 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 ZNF18P17022 549 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 CALRP27797 417 aaKnown RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 SMARCA1P28370 1054 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 TKTP29401 623 aaKnown RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 ALDH1A3P47895 512 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 BFSP1Q12934 665 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 GRIK2Q13002 908 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 NMIQ13287 307 aaPredicted RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 SMAD1Q15797 465 aaKnown RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 CRY1Q16526 586 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 IMMTQ16891 758 aaKnown RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 INAVAQ3KP66 663 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 STXBP5Q5T5C0 1151 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 TPGS2Q68CL5 300 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 ALG1LQ6GMV1 187 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 DTHD1Q6ZMT9 781 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 GBP6Q6ZN66 633 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 NIPA1Q7RTP0 329 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 SPATS2Q86XZ4 545 aaKnown RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 EXOC8Q8IYI6 725 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 TCEAL8Q8IYN2 117 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 GPATCH11Q8N954 259 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 TC2NQ8N9U0 490 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 DAGLBQ8NCG7 672 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 LINC00301Q8NCQ3 95 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 ANKRD20A12PQ8NF67 263 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 OLIG1Q8TAK6 271 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms