RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 CCDC172P0C7W6 258 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 HGSNATQ68CP4 663 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 CYP2U1Q7Z449 544 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 IRF2BP2Q7Z5L9 587 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 OSTM1Q86WC4 334 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 TMEM86AQ8N2M4 240 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 ARL14EPQ8N8R7 260 aaPredicted RBP22.08■■□□□ 1.13
PKP3-205ENST00000527442 KDF1Q8NAX2 398 aaPredicted RBP22.08■■□□□ 1.13
PKP3-205ENST00000527442 SH3RF2Q8TEC5 729 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 USP33Q8TEY7 942 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 KBTBD7Q8WVZ9 684 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 ACBD6Q9BR61 282 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 ZNHIT6Q9NWK9 470 aaKnown RBP22.08■■□□□ 1.13
PKP3-205ENST00000527442 DDX43Q9NXZ2 648 aaKnown RBP22.08■■□□□ 1.13
PKP3-205ENST00000527442 GTF3C4Q9UKN8 822 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 PCDHB4Q9Y5E5 795 aa22.08■■□□□ 1.13
PKP3-205ENST00000527442 ASPMQ8IZT6 3477 aa22.08■■□□□ 1.12
PKP3-205ENST00000527442 PLXND1Q9Y4D7 1925 aa22.08■■□□□ 1.12
PKP3-205ENST00000527442 ASCC3Q8N3C0 2202 aaKnown RBP22.07■■□□□ 1.12
PKP3-205ENST00000527442 C2orf78A6NCI8 922 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 HCRTO43612 131 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 KRT5P13647 590 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 CD58P19256 250 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 WARSP23381 471 aaKnown RBP22.07■■□□□ 1.12
PKP3-205ENST00000527442 OPRD1P41143 372 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 CDH8P55286 799 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 SEC13P55735 322 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 USP39Q53GS9 565 aaKnown RBP22.07■■□□□ 1.12
PKP3-205ENST00000527442 C2orf27AQ580R0 203 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 ANO7Q6IWH7 933 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 TMEM270Q6UE05 265 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 UNC93AQ86WB7 457 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 RASSF3Q86WH2 238 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 ADGRF2Q8IZF7 708 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 RBBP8NLQ8NC74 664 aaPredicted RBP22.07■■□□□ 1.12
PKP3-205ENST00000527442 MRPL45Q9BRJ2 306 aaKnown RBP22.07■■□□□ 1.12
PKP3-205ENST00000527442 LINC00597Q9H2U6 94 aa22.07■■□□□ 1.12
PKP3-205ENST00000527442 K7EQS6 105 aa22.06■■□□□ 1.12
PKP3-205ENST00000527442 SERPING1P05155 500 aa22.06■■□□□ 1.12
PKP3-205ENST00000527442 HOXB3P14651 431 aaPredicted RBP22.06■■□□□ 1.12
PKP3-205ENST00000527442 CSRP1P21291 193 aaKnown RBP22.06■■□□□ 1.12
PKP3-205ENST00000527442 CLCN1P35523 988 aa22.06■■□□□ 1.12
PKP3-205ENST00000527442 DEKP35659 375 aaKnown RBP22.06■■□□□ 1.12
PKP3-205ENST00000527442 CCZ1BP86790 482 aa22.06■■□□□ 1.12
PKP3-205ENST00000527442 CCZ1P86791 482 aaPredicted RBP22.06■■□□□ 1.12
PKP3-205ENST00000527442 GAB4Q2WGN9 574 aa22.06■■□□□ 1.12
PKP3-205ENST00000527442 C11orf74Q86VG3 221 aa22.06■■□□□ 1.12
PKP3-205ENST00000527442 MDGA1Q8NFP4 955 aa22.06■■□□□ 1.12
PKP3-205ENST00000527442 WHAMMQ8TF30 809 aa22.06■■□□□ 1.12
PKP3-205ENST00000527442 BAG1Q99933 345 aaPredicted RBP22.06■■□□□ 1.12
PKP3-205ENST00000527442 BZW2Q9Y6E2 419 aaKnown RBP22.06■■□□□ 1.12
PKP3-205ENST00000527442 SSU72P8A0A1W2PR75 194 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 GABRDO14764 452 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 CYP26A1O43174 497 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 PAEPP09466 180 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 CEACAM1P13688 526 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 USP8P40818 1118 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 DHPSP49366 369 aaPredicted RBP22.05■■□□□ 1.12
PKP3-205ENST00000527442 BPIFB4P59827 614 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 IRX4P78413 519 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 NR1H3Q13133 447 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 COL9A2Q14055 689 aaPredicted RBP22.05■■□□□ 1.12
PKP3-205ENST00000527442 TMTC1Q8IUR5 882 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 SCN4BQ8IWT1 228 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 CCDC33Q8N5R6 958 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 EPS8L1Q8TE68 723 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 GATA6Q92908 595 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 SYT11Q9BT88 431 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 SCNM1Q9BWG6 230 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 KCNF1Q9H3M0 494 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 ARHGAP20Q9P2F6 1191 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 HMGXB4Q9UGU5 601 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 MMP17Q9ULZ9 603 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 NME7Q9Y5B8 376 aa22.05■■□□□ 1.12
PKP3-205ENST00000527442 PKD1L2Q7Z442 2459 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 NRDCO43847 1150 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 NFATC1O95644 943 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 HNRNPLP14866 589 aaKnown RBP eCLIP22.04■■□□□ 1.12
PKP3-205ENST00000527442 TCF3P15923 654 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 ANXA13P27216 316 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 NDST1P52848 882 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 RAD23BP54727 409 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 ZXDBP98169 803 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 KLHL30Q0D2K2 578 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 MAPK8IP2Q13387 824 aaPredicted RBP22.04■■□□□ 1.12
PKP3-205ENST00000527442 UAP1L1Q3KQV9 507 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 CFAP221Q4G0U5 840 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 SPATA2LQ8IUW3 424 aaPredicted RBP22.04■■□□□ 1.12
PKP3-205ENST00000527442 DEFB124Q8NES8 71 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 PIGKQ92643 395 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 TWNKQ96RR1 684 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 ELOVL4Q9GZR5 314 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 NOCTQ9UK39 431 aaKnown RBP22.04■■□□□ 1.12
PKP3-205ENST00000527442 ARHGAP26Q9UNA1 814 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 ADAMTS9Q9P2N4 1935 aa22.04■■□□□ 1.12
PKP3-205ENST00000527442 CYP11B1P15538 503 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 HDCP19113 662 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 LHX1P48742 406 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 PDE6CP51160 858 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 ARID5AQ03989 594 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms