RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 MED7O43513 233 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 PIGRP01833 764 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 ZNF286BP0CG31 522 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 TXNP10599 105 aaKnown RBP12.95□□□□□ -0.34
CAPN1-208ENST00000527323 CDH8P55286 799 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 ACTR3P61158 418 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 KRT81Q14533 505 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 HSF5Q4G112 596 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-208ENST00000527323 APOL6Q9BWW8 343 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 PPM1HQ9ULR3 514 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 OPHN1O60890 802 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 TRUB2O95900 331 aaKnown RBP12.94□□□□□ -0.34
CAPN1-208ENST00000527323 OATP04181 439 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 EPHB1P54762 984 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 YWHAZP63104 245 aaKnown RBP12.94□□□□□ -0.34
CAPN1-208ENST00000527323 RASSF3Q86WH2 238 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 HIPK4Q8NE63 616 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 GSTCDQ8NEC7 633 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 CMASQ8NFW8 434 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-208ENST00000527323 ZFAND2BQ8WV99 257 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 IFT43Q96FT9 208 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 TUBGCP5Q96RT8 1024 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 EBF4Q9BQW3 602 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 ADPGKQ9BRR6 497 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 ASNSD1Q9NWL6 643 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 PAK5Q9P286 719 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 ERBB2P04626 1255 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 C6orf222P0C671 652 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-208ENST00000527323 GSTT1P30711 240 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 ARL2P36404 184 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 SLC25A3Q00325 362 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 TFDP2Q14188 446 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 HIC1Q14526 733 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 KCNJ11Q14654 390 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 FAM102AQ5T9C2 384 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-208ENST00000527323 MTHFD1LQ6UB35 978 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 MYLK4Q86YV6 388 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-208ENST00000527323 TMEM130Q8N3G9 435 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 NPLOC4Q8TAT6 608 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 FAM192AQ9GZU8 254 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 TTLL3Q9Y4R7 772 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 PARP14Q460N5 1801 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 CHADO15335 359 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 ADCY6O43306 1168 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 ZBED1O96006 694 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 IL1BP01584 269 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 TNNC2P02585 160 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 CDH5P33151 784 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-208ENST00000527323 MRPS5P82675 430 aaKnown RBP12.94□□□□□ -0.34
CAPN1-208ENST00000527323 SH3PXD2AQ5TCZ1 1133 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 FAM91A1Q658Y4 838 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 ARMCX2Q7L311 632 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 GPR142Q7Z601 462 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 RASAL3Q86YV0 1011 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 POU5F2Q8N7G0 328 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 CHST13Q8NET6 341 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 SLC26A7Q8TE54 656 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 PYDC1Q8WXC3 89 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 DHX33Q9H6R0 707 aaKnown RBP12.94□□□□□ -0.34
CAPN1-208ENST00000527323 RNF19AQ9NV58 838 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 WDR70Q9NW82 654 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 WDR90Q96KV7 1748 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 ADGRA2Q96PE1 1338 aa12.94□□□□□ -0.34
CAPN1-208ENST00000527323 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-208ENST00000527323 CARNS1A5YM72 827 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 NOP56O00567 594 aaKnown RBP12.93□□□□□ -0.34
CAPN1-208ENST00000527323 ADCY3O60266 1144 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 GRAP2O75791 330 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 RTN3O95197 1032 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-208ENST00000527323 TCF7P36402 384 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-208ENST00000527323 TMEM62Q0P6H9 643 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 CAPSQ13938 189 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 NOMO1Q15155 1222 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 CES4AQ5XG92 561 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 XYLT1Q86Y38 959 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 WDR75Q8IWA0 830 aaKnown RBP12.93□□□□□ -0.34
CAPN1-208ENST00000527323 FNIP1Q8TF40 1166 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 TRIM56Q9BRZ2 755 aaKnown RBP12.93□□□□□ -0.34
CAPN1-208ENST00000527323 SHCBP1LQ9BZQ2 653 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 C20orf27Q9GZN8 174 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 KLC2Q9H0B6 622 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 PRPSAP2O60256 369 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 RFPL1O75677 317 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 YY1P25490 414 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 RBL1P28749 1068 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 CTGFP29279 349 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 ASPHQ12797 758 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 CDC16Q13042 620 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 CRHR2Q13324 411 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 CUL3Q13618 768 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 TAZQ16635 292 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 RGMBQ6NW40 437 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 PRPF31Q8WWY3 499 aaKnown RBP12.93□□□□□ -0.34
CAPN1-208ENST00000527323 PPP2R3CQ969Q6 453 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 CCDC124Q96CT7 223 aaKnown RBP12.93□□□□□ -0.34
CAPN1-208ENST00000527323 SPATA33Q96N06 139 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 MRPL4Q9BYD3 311 aaKnown RBP12.93□□□□□ -0.34
CAPN1-208ENST00000527323 GPATCH2LQ9NWQ4 482 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 FLRT1Q9NZU1 646 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 SOX13Q9UN79 622 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms