RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 EGFLAMQ63HQ2 1017 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 GRAMD4Q6IC98 578 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 ERMP1Q7Z2K6 904 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 DGLUCYQ7Z3D6 616 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 TADA2BQ86TJ2 420 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 ARHGAP18Q8N392 663 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 PPM1KQ8N3J5 372 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 TRIML1Q8N9V2 468 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 RBBP8NLQ8NC74 664 aaPredicted RBP10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 SLC35F5Q8WV83 523 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 RLN3Q8WXF3 142 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 KCTD13Q8WZ19 329 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 EDEM1Q92611 657 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 BHMTQ93088 406 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 LOXL4Q96JB6 756 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 INTS2Q9H0H0 1204 aaKnown RBP10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 LRRC4Q9HBW1 653 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 CD248Q9HCU0 757 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 MARCH2Q9P0N8 246 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 WDR35Q9P2L0 1181 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 HESX1Q9UBX0 185 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 AGO1Q9UL18 857 aaKnown RBP10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 CLEC4EQ9ULY5 219 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 STARD13Q9Y3M8 1113 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 DNAH14Q0VDD8 3507 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 A0A1W2PQF6 199 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 DCDC2BA2VCK2 349 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 GNA14O95837 355 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 PENKP01210 267 aaPredicted RBP10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 AFPP02771 609 aaKnown RBP10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 LCP1P13796 627 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 SLC8A3P57103 927 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 DAOAP59103 153 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 COG7P83436 770 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 GCNT1Q02742 428 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 GOLGA8FQ08AF8 430 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 GOLGA8DPQ0D2H9 430 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 TRIP4Q15650 581 aaPredicted RBP10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 HSF5Q4G112 596 aaPredicted RBP10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 EOGTQ5NDL2 527 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 BSPRYQ5W0U4 402 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 GJB7Q6PEY0 223 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 DENND1CQ8IV53 801 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 SCML4Q8N228 414 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 ZNF513Q8N8E2 541 aaPredicted RBP10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 CLEC4CQ8WTT0 213 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 ERLEC1Q96DZ1 483 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 CDK5RAP1Q96SZ6 601 aaKnown RBP10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 CRACR2AQ9BSW2 395 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 SFMBT1Q9UHJ3 866 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 MBD1Q9UIS9 605 aaPredicted RBP10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 RWDD2AQ9UIY3 292 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 CNTN6Q9UQ52 1028 aa10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.93□□□□□ -0.66
PRPF40B-204ENST00000527253 TCRBV21S2A2A0A5A6 115 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 GFRA2O00451 464 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 SLC30A4O14863 429 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 FYNP06241 537 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 ZNF806P0C7X5 589 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 SETSIPP0DME0 302 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 GABRG2P18507 467 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 SLC9A1P19634 815 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 DGKGP49619 791 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 FOXK2Q01167 660 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 CETN1Q12798 172 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 MAP7D1Q3KQU3 841 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 USP39Q53GS9 565 aaKnown RBP10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 TCEAL6Q6IPX3 200 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 KIAA1211LQ6NV74 962 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 DENND1BQ6P3S1 775 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 RSRC2Q7L4I2 434 aaKnown RBP10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 FMNL3Q8IVF7 1028 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 FAM217AQ8IXS0 508 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 KCNV2Q8TDN2 545 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 HMGB4Q8WW32 186 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 TCEAL3Q969E4 200 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 XPO6Q96QU8 1125 aaKnown RBP10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 DCLK3Q9C098 648 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 CLSTN2Q9H4D0 955 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 UBE2TQ9NPD8 197 aaPredicted RBP10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 ACP6Q9NPH0 428 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 CNGB3Q9NQW8 809 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 STRIP2Q9ULQ0 834 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 ZNF510Q9Y2H8 683 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 THADAQ6YHU6 1953 aa10.92□□□□□ -0.66
PRPF40B-204ENST00000527253 BCLAF3A2AJT9 711 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 BECN2A8MW95 431 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 WASH3PC4AMC7 463 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 M0QYV0 167 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 MSI1O43347 362 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 RHOBTB1O94844 696 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 NTSR1P30989 418 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 GBP1P32455 592 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 MPLP40238 635 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 P2RY2P41231 377 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 GPD2P43304 727 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 RPL34P49207 117 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 MFAP3P55082 362 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms