RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 TUBGCP2Q9BSJ2 902 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 TRIM62Q9BVG3 475 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 NDST4Q9H3R1 872 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 DNAJC17Q9NVM6 304 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 RPP40O75818 363 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 LATS1O95835 1130 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 PENKP01210 267 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 EEF1GP26641 437 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 GNA15P30679 374 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 HARS2P49590 506 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 RGS7P49802 495 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 KDSRQ06136 332 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 MESP2Q0VG99 397 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 CRY1Q16526 586 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 VWA3BQ502W6 1294 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 TPGS1Q6ZTW0 290 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 FMNL3Q8IVF7 1028 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 FAM217AQ8IXS0 508 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 IL17RCQ8NAC3 791 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 ENOX1Q8TC92 643 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 ZNF606Q8WXB4 792 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 NDRG1Q92597 394 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 LOXL4Q96JB6 756 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 HHIPQ96QV1 700 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 FBXO10Q9UK96 956 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 AGO1Q9UL18 857 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 KIAA1549LQ6ZVL6 1849 aa19.28■□□□□ 0.68
TSPAN4-216ENST00000526055 GABBR2O75899 941 aa19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 ALDH1A2O94788 518 aa19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 LETM1O95202 739 aaPredicted RBP19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 LTFP02788 710 aa19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 CYBBP04839 570 aa19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 BEND5Q7L4P6 421 aa19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 CACNA2D4Q7Z3S7 1137 aa19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 C11orf74Q86VG3 221 aa19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 RASSF3Q86WH2 238 aa19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 GPT2Q8TD30 523 aa19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 IRX2Q9BZI1 471 aaPredicted RBP19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 STOML2Q9UJZ1 356 aa19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 SLC27A6Q9Y2P4 619 aa19.27■□□□□ 0.68
TSPAN4-216ENST00000526055 BECN2A8MW95 431 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 KCNJ18B7U540 433 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 THAP12O43422 761 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 KLF8O95600 359 aaPredicted RBP19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 MBD3O95983 291 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 HMBSP08397 361 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 TIE1P35590 1138 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 PXNP49023 591 aaPredicted RBP19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 DGKGP49619 791 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 SRSF5Q13243 272 aaKnown RBP19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 KCNJ12Q14500 433 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 E2F5Q15329 346 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 ARHGAP44Q17R89 818 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 MIIPQ5JXC2 388 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 C10orf76Q5T2E6 689 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 GJB7Q6PEY0 223 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 DENND1CQ8IV53 801 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 DCLK2Q8N568 766 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 CCDC33Q8N5R6 958 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 ALLCQ8N6M5 410 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 TXNDC5Q8NBS9 432 aaKnown RBP19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 EDEM1Q92611 657 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 SLC4A5Q9BY07 1137 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 POLMQ9NP87 494 aaPredicted RBP19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 SIX2Q9NPC8 291 aa19.26■□□□□ 0.67
TSPAN4-216ENST00000526055 FOXD2O60548 495 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 CALCAP01258 141 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 CISD3P0C7P0 127 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 PTK2Q05397 1052 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 RING1Q06587 406 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 NNTQ13423 1086 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 TCP11X2Q5H9J9 407 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 FYB2Q5VWT5 728 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 DENND1BQ6P3S1 775 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 TMEM110Q86TL2 294 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 SFTPA1Q8IWL2 248 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 UNC45BQ8IWX7 931 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 KIAA2013Q8IYS2 634 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 ZNF513Q8N8E2 541 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 ZC3H10Q96K80 434 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 SLC2A11Q9BYW1 496 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 ST7Q9NRC1 585 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 POLR3BQ9NW08 1133 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 SFMBT1Q9UHJ3 866 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 DNAJC12Q9UKB3 198 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 PCDHGC3Q9UN70 934 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 NFE2L3Q9Y4A8 694 aa19.25■□□□□ 0.67
TSPAN4-216ENST00000526055 SGK1O00141 431 aa19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 NPC1O15118 1278 aa19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 IGLV3-27P01718 113 aa19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 HOXC13P31276 330 aa19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 USP8P40818 1118 aa19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 BPIFB4P59827 614 aa19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 USP39Q53GS9 565 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 EMC10Q5UCC4 262 aa19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 NUGGCQ68CJ6 796 aa19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 FAM160A2Q8N612 972 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 AZIN2Q96A70 460 aa19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 LHX5Q9H2C1 402 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms