RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 RBMS2Q15434 407 aaKnown RBP2.13□□□□□ -2.07
CD44-212ENST00000524922 FAM187BQ17R55 369 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 PTCHD3Q3KNS1 767 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 BRDTQ58F21 947 aaPredicted RBP2.13□□□□□ -2.07
CD44-212ENST00000524922 AWAT1Q58HT5 328 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 KHDC1LQ5JSQ8 128 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 L1TD1Q5T7N2 865 aaKnown RBP2.13□□□□□ -2.07
CD44-212ENST00000524922 SFTPA1Q8IWL2 248 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 SLC15A3Q8IY34 581 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 KCNH5Q8NCM2 988 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 DIS3LQ8TF46 1054 aaKnown RBP2.13□□□□□ -2.07
CD44-212ENST00000524922 OSCP1Q8WVF1 389 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 XAGE5Q8WWM1 108 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 CDK5RAP3Q96JB5 506 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 NT5C1BQ96P26 610 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 SIGLEC11Q96RL6 698 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 MMS19Q96T76 1030 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 SMAD5Q99717 465 aaKnown RBP2.13□□□□□ -2.07
CD44-212ENST00000524922 EFHD1Q9BUP0 239 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 PCDH12Q9NPG4 1184 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 TRNAU1APQ9NX07 287 aaKnown RBP2.13□□□□□ -2.07
CD44-212ENST00000524922 SHOC2Q9UQ13 582 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 STXBP5LQ9Y2K9 1186 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 LUC7L2Q9Y383 392 aaKnown RBP2.13□□□□□ -2.07
CD44-212ENST00000524922 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.13□□□□□ -2.07
CD44-212ENST00000524922 USP6P35125 1406 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 CPSF1Q10570 1443 aaKnown RBP2.13□□□□□ -2.07
CD44-212ENST00000524922 PPIP5K1Q6PFW1 1433 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 QRICH2Q9H0J4 1663 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 CNTNAP1P78357 1384 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 KIF24Q5T7B8 1368 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 ANKRD36BQ8N2N9 1353 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 TTC28Q96AY4 2481 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 NOTCH4Q99466 2003 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 CCDC187A0A096LP49 1063 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 TMEM233B4DJY2 109 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 BTBD19C9JJ37 291 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 H3BNC9 293 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 AP4M1O00189 453 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 SPRY2O43597 315 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 TLR2O60603 784 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 PMPCBO75439 489 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 SNUPNO95149 360 aaKnown RBP2.12□□□□□ -2.07
CD44-212ENST00000524922 MT-CO3P00414 261 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 PRKCBP05771 671 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 THP07101 528 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 HSPA1AP0DMV8 641 aaKnown RBP2.12□□□□□ -2.07
CD44-212ENST00000524922 HSPA1BP0DMV9 641 aaKnown RBP2.12□□□□□ -2.07
CD44-212ENST00000524922 CYP2C9P11712 490 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 MYCLP12524 364 aaPredicted RBP2.12□□□□□ -2.07
CD44-212ENST00000524922 TNFRSF1BP20333 461 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 GKP32189 559 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 THBS3P49746 956 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 DIO1P49895 249 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 MAP2K1Q02750 393 aaPredicted RBP2.12□□□□□ -2.07
CD44-212ENST00000524922 LMAN2Q12907 356 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 CTBP1Q13363 440 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 GTF2H3Q13889 308 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 ZNF267Q14586 743 aaPredicted RBP2.12□□□□□ -2.07
CD44-212ENST00000524922 LRRC41Q15345 812 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 TBC1D25Q3MII6 688 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 AMOTQ4VCS5 1084 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 SWSAP1Q6NVH7 229 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 MIS18BP1Q6P0N0 1132 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 SHC4Q6S5L8 630 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 LAYNQ6UX15 382 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 C9orf47Q6ZRZ4 202 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 CNGA4Q8IV77 575 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 LIX1LQ8IVB5 337 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 PELI3Q8N2H9 469 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 NANOGP1Q8N7R0 232 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 RBMXL3Q8N7X1 1067 aaKnown RBP2.12□□□□□ -2.07
CD44-212ENST00000524922 ADAMTS18Q8TE60 1221 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 TMEM171Q8WVE6 324 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 KBTBD7Q8WVZ9 684 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 MAP4K1Q92918 833 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 CHMP4CQ96CF2 233 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 C1GALT1C1Q96EU7 318 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 MARK4Q96L34 752 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 FAM118BQ9BPY3 351 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 C17orf80Q9BSJ5 609 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 RHOBTB2Q9BYZ6 727 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 XPNPEP3Q9NQH7 507 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 DNMT3BQ9UBC3 853 aaKnown RBP2.12□□□□□ -2.07
CD44-212ENST00000524922 LPAR3Q9UBY5 353 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 CFAP65Q6ZU64 1925 aaKnown RBP2.12□□□□□ -2.07
CD44-212ENST00000524922 TTC21AQ8NDW8 1320 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 KIF13BQ9NQT8 1826 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 PIK3C2AO00443 1686 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 ZNF831Q5JPB2 1677 aa2.12□□□□□ -2.07
CD44-212ENST00000524922 PLEKHH1Q9ULM0 1364 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 COL18A1P39060 1754 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 H3BML4 177 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 AGPSO00116 658 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 EXOC5O00471 708 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 DLDP09622 509 aaKnown RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 AGFG1P52594 562 aaKnown RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 POLGP54098 1239 aaPredicted RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 BCAT1P54687 386 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 TIAL1Q01085 375 aaKnown RBP eCLIP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms