RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 CA8P35219 290 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 RAD52P43351 418 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 MAPK9P45984 424 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 NTHL1P78549 312 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 CREB5Q02930 508 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 KRT17Q04695 432 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 BECN1Q14457 450 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 TMEM266Q2M3C6 531 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 ATP13A4Q4VNC1 1196 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 C20orf194Q5TEA3 1177 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 CPLX2Q6PUV4 134 aaKnown RBP5.61□□□□□ -1.51
PABPC1-223ENST00000523636 USP53Q70EK8 1073 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 GPR155Q7Z3F1 870 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 SRLQ86TD4 932 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 CCDC103Q8IW40 242 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 LILRA2Q8N149 483 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 ARL10Q8N8L6 244 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 NAXEQ8NCW5 288 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.61□□□□□ -1.511e-323■□□□□ 8.9
PABPC1-223ENST00000523636 DNAJB3Q8WWF6 145 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 SMG7Q92540 1137 aaKnown RBP5.61□□□□□ -1.51
PABPC1-223ENST00000523636 STAMQ92783 540 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 VMP1Q96GC9 406 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 ZNF558Q96NG5 402 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 FTHL17Q9BXU8 183 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 ABCG4Q9H172 646 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 RANBP17Q9H2T7 1088 aaKnown RBP5.61□□□□□ -1.51
PABPC1-223ENST00000523636 SMC4Q9NTJ3 1288 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 MBNL3Q9NUK0 354 aaKnown RBP5.61□□□□□ -1.51
PABPC1-223ENST00000523636 POLR3BQ9NW08 1133 aaPredicted RBP5.61□□□□□ -1.51
PABPC1-223ENST00000523636 COL20A1Q9P218 1284 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 EBF1Q9UH73 591 aa5.61□□□□□ -1.51
PABPC1-223ENST00000523636 TMEFF2Q9UIK5 374 aaPredicted RBP5.61□□□□□ -1.51
PABPC1-223ENST00000523636 MBD1Q9UIS9 605 aaPredicted RBP5.61□□□□□ -1.51
PABPC1-223ENST00000523636 DCHS2Q6V1P9 2916 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 IGSF9BQ9UPX0 1349 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 ARNTLO00327 626 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 IPO5O00410 1097 aaKnown RBP5.6□□□□□ -1.51
PABPC1-223ENST00000523636 EXTL3O43909 919 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 NPHS1O60500 1241 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 BCAR3O75815 825 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 MBD4O95243 580 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 CNOT4O95628 575 aaKnown RBP5.6□□□□□ -1.51
PABPC1-223ENST00000523636 LGALS2P05162 132 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 ICAM1P05362 532 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 RNASE1P07998 156 aaKnown RBP5.6□□□□□ -1.51
PABPC1-223ENST00000523636 FTH1P19P0C7X4 201 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 MYF5P13349 255 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 CD59P13987 128 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 KIF5BP33176 963 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 PPM1AP35813 382 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 METAP2P50579 478 aaKnown RBP eCLIP5.6□□□□□ -1.514e-10■■■□□ 17.4
PABPC1-223ENST00000523636 STAT2P52630 851 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 RARSP54136 660 aaKnown RBP5.6□□□□□ -1.51
PABPC1-223ENST00000523636 GPR85P60893 370 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 KRT83P78385 493 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 FAM189BP81408 668 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 HMGN5P82970 282 aaKnown RBP5.6□□□□□ -1.51
PABPC1-223ENST00000523636 IFT88Q13099 833 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 PRKG2Q13237 762 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 LAPTM5Q13571 262 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 TRIM14Q14142 442 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 MINDY4Q4G0A6 757 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 MARCH8Q5T0T0 291 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 ANKRD45Q5TZF3 282 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 C12orf60Q5U649 245 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 GALNT18Q6P9A2 607 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 GALNT5Q7Z7M9 940 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 TBC1D1Q86TI0 1168 aaPredicted RBP5.6□□□□□ -1.51
PABPC1-223ENST00000523636 ZNF280BQ86YH2 543 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 SAMD14Q8IZD0 417 aaPredicted RBP5.6□□□□□ -1.51
PABPC1-223ENST00000523636 LCORLQ8N3X6 602 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 FAM26EQ8N5C1 309 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 GMCL1P1Q8NEA9 526 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 DNERQ8NFT8 737 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 IPCEF1Q8WWN9 437 aaPredicted RBP5.6□□□□□ -1.51
PABPC1-223ENST00000523636 TBC1D5Q92609 795 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 FRAT1Q92837 279 aaPredicted RBP5.6□□□□□ -1.51
PABPC1-223ENST00000523636 WBP1Q96G27 269 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 PHF20Q9BVI0 1012 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 NT5C3AQ9H0P0 336 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 SLC32A1Q9H598 525 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 ZFP64Q9NPA5 681 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 PRDM7Q9NQW5 492 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 RGS18Q9NS28 235 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 INTS7Q9NVH2 962 aaKnown RBP5.6□□□□□ -1.51
PABPC1-223ENST00000523636 C19orf73Q9NVV2 129 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 CLIP2Q9UDT6 1046 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 XPO7Q9UIA9 1087 aaKnown RBP5.6□□□□□ -1.51
PABPC1-223ENST00000523636 ADAMTS6Q9UKP5 1117 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 CCPG1Q9ULG6 757 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 TTLL3Q9Y4R7 772 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 PCDHB7Q9Y5E2 793 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 CCDC168Q8NDH2 2452 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 EVPLQ92817 2033 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 MYH7P12883 1935 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 STAB1Q9NY15 2570 aa5.6□□□□□ -1.51
PABPC1-223ENST00000523636 KNL1Q8NG31 2342 aa5.59□□□□□ -1.51
PABPC1-223ENST00000523636 NCANO14594 1321 aa5.59□□□□□ -1.51
PABPC1-223ENST00000523636 A0A1B0GVC2 190 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms