RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 LARP1BQ659C4 914 aaKnown RBP7.27□□□□□ -1.25
SDCBP-210ENST00000522843 SLC27A1Q6PCB7 646 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 CAMKK1Q8N5S9 505 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 MDM1Q8TC05 714 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 TMEM209Q96SK2 561 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 TRIM6Q9C030 488 aaPredicted RBP7.27□□□□□ -1.25
SDCBP-210ENST00000522843 CYP4F11Q9HBI6 524 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 RBM28Q9NW13 759 aaKnown RBP7.27□□□□□ -1.25
SDCBP-210ENST00000522843 SLC8A2Q9UPR5 921 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 PI4KAP42356 2102 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 PTPRDP23468 1912 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 KIAA1549LQ6ZVL6 1849 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 TRIP11Q15643 1979 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 NUP210Q8TEM1 1887 aaPredicted RBP7.26□□□□□ -1.25
SDCBP-210ENST00000522843 MYO16Q9Y6X6 1858 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 CYP3A7-CYP3A51PA0A087WV96 503 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 PRRG1O14668 218 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 TBX3O15119 743 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 ASAP2O43150 1006 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 RECQL4O94761 1208 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 B3GAT3O94766 335 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 PRAMEF12O95522 483 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 THP07101 528 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 GLRA2P23416 452 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 CYP3A7P24462 503 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 POLR2BP30876 1174 aaKnown RBP7.26□□□□□ -1.25
SDCBP-210ENST00000522843 QARSP47897 775 aaKnown RBP7.26□□□□□ -1.25
SDCBP-210ENST00000522843 CLCNKBP51801 687 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 ARPP19P56211 112 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 ERVFRD-1P60508 538 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 CLCQ05315 142 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 PCBP1Q15365 356 aaKnown RBP eCLIP7.26□□□□□ -1.25
SDCBP-210ENST00000522843 ELF2Q15723 593 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 UPP1Q16831 310 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 SPATS1Q496A3 300 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 ANKS3Q6ZW76 656 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 ARID3BQ8IVW6 561 aaPredicted RBP7.26□□□□□ -1.25
SDCBP-210ENST00000522843 YAF2Q8IY57 180 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 LINC01356Q8N9X3 169 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 TCEANC2Q96MN5 208 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 PPP1R10Q96QC0 940 aaKnown RBP7.26□□□□□ -1.25
SDCBP-210ENST00000522843 FOXP3Q9BZS1 431 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 C6orf50Q9HD87 102 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 HPS4Q9NQG7 708 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 FSCN3Q9NQT6 498 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 TMEM74BQ9NUR3 256 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 EVLQ9UI08 416 aaPredicted RBP7.26□□□□□ -1.25
SDCBP-210ENST00000522843 FBXL5Q9UKA1 691 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 SPTA1P02549 2419 aa7.26□□□□□ -1.25
SDCBP-210ENST00000522843 ADAMTS9Q9P2N4 1935 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 SSU72P8A0A1W2PR75 194 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 TRDMT1O14717 391 aaKnown RBP7.25□□□□□ -1.25
SDCBP-210ENST00000522843 SLC27A2O14975 620 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 SLC37A4O43826 429 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 ENGP17813 658 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 U2AF2P26368 475 aaKnown RBP eCLIP7.25□□□□□ -1.25
SDCBP-210ENST00000522843 YWHABP31946 246 aaKnown RBP7.25□□□□□ -1.25
SDCBP-210ENST00000522843 ELF1P32519 619 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 ARL2P36404 184 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 PLP2Q04941 152 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 POU5F1BQ06416 359 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 EFEMP1Q12805 493 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 ARHGAP29Q52LW3 1261 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 GLRA4Q5JXX5 417 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 OVOS1Q6IE37 1185 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 CCNI2Q6ZMN8 369 aaPredicted RBP7.25□□□□□ -1.25
SDCBP-210ENST00000522843 GK5Q6ZS86 529 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 GAREM2Q75VX8 874 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 SKAP1Q86WV1 359 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 HACE1Q8IYU2 909 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 TBCKQ8TEA7 893 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 TCP11Q8WWU5 503 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 PIGKQ92643 395 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 E2F7Q96AV8 911 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 ZNF512Q96ME7 567 aaPredicted RBP7.25□□□□□ -1.25
SDCBP-210ENST00000522843 POLR3CQ9BUI4 534 aaPredicted RBP7.25□□□□□ -1.25
SDCBP-210ENST00000522843 HDAC8Q9BY41 377 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 NFKBIZQ9BYH8 718 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 TPSD1Q9BZJ3 242 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 LSG1Q9H089 658 aaKnown RBP7.25□□□□□ -1.25
SDCBP-210ENST00000522843 PDZD7Q9H5P4 517 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 ASAH2Q9NR71 780 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 GMIPQ9P107 970 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 YIPF1Q9Y548 306 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 SHROOM3Q8TF72 1996 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 PCDH15Q96QU1 1955 aa7.25□□□□□ -1.25
SDCBP-210ENST00000522843 PTPRBP23467 1997 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 TMEM82A0PJX8 343 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 EIF4E1BA6NMX2 242 aaKnown RBP7.24□□□□□ -1.25
SDCBP-210ENST00000522843 GOLGA8AA7E2F4 631 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 GOLGA8BA8MQT2 603 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 H0Y626 953 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 ZBTB43O43298 467 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 ATG13O75143 517 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 TRIM16O95361 564 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 APBB3O95704 486 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 MPOP05164 745 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 CD59P13987 128 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 PCBP3P57721 371 aaKnown RBP7.24□□□□□ -1.25
SDCBP-210ENST00000522843 EXOSC10Q01780 885 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms