RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 CCDC6Q16204 474 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 PM20D1Q6GTS8 502 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 TMEM270Q6UE05 265 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 TRIM59Q8IWR1 403 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 SIX6OS1Q8N1H7 587 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 TRIML1Q8N9V2 468 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 OLIG1Q8TAK6 271 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 PLD4Q96BZ4 506 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 IPO9Q96P70 1041 aaKnown RBP11.26□□□□□ -0.61
PVT1-209ENST00000520913 ZDHHC4Q9NPG8 344 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 VPS45Q9NRW7 570 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 MARCH2Q9P0N8 246 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 KIAA1257Q9ULG3 409 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 STARD13Q9Y3M8 1113 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 M0QYV0 167 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 TULP2O00295 520 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 TRIM24O15164 1050 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 GDF9O60383 454 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 ADAM23O75077 832 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 AFPP02771 609 aaKnown RBP11.25□□□□□ -0.61
PVT1-209ENST00000520913 HMBSP08397 361 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 NTSR1P30989 418 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 P2RY2P41231 377 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 LIMK1P53667 647 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 UBE2HP62256 183 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 GCNT1Q02742 428 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 CREB5Q02930 508 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 EMC10Q5UCC4 262 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 EGFLAMQ63HQ2 1017 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 BHLHA9Q7RTU4 235 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 CYP2U1Q7Z449 544 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 SCML4Q8N228 414 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 HMGB4Q8WW32 186 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 KCTD13Q8WZ19 329 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 BHMTQ93088 406 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.25□□□□□ -0.61
PVT1-209ENST00000520913 PCDHB4Q9Y5E5 795 aa11.25□□□□□ -0.61
PVT1-209ENST00000520913 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.25□□□□□ -0.61
PVT1-209ENST00000520913 SLC12A8A0AV02 714 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 BCLAF3A2AJT9 711 aaKnown RBP11.24□□□□□ -0.61
PVT1-209ENST00000520913 FGFR1OPO95684 399 aaKnown RBP11.24□□□□□ -0.61
PVT1-209ENST00000520913 PENKP01210 267 aaPredicted RBP11.24□□□□□ -0.61
PVT1-209ENST00000520913 CYBBP04839 570 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 BCKDHBP21953 392 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 STX17P56962 302 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 DAOAP59103 153 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 KCNH2Q12809 1159 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 BYSLQ13895 437 aaKnown RBP11.24□□□□□ -0.61
PVT1-209ENST00000520913 PKDCCQ504Y2 493 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 FYB2Q5VWT5 728 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 IL31Q6EBC2 164 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 SDE2Q6IQ49 451 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 LCLAT1Q6UWP7 414 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 TOGARAM2Q6ZUX3 1019 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 ARHGEF19Q8IW93 802 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 CHPFQ8IZ52 775 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 PGBD3Q8N328 593 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 CPXM2Q8N436 756 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 RBBP8NLQ8NC74 664 aaPredicted RBP11.24□□□□□ -0.61
PVT1-209ENST00000520913 LMO3Q8TAP4 145 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 UBA3Q8TBC4 463 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 RNF139Q8WU17 664 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 DDX1Q92499 740 aaKnown RBP11.24□□□□□ -0.61
PVT1-209ENST00000520913 SMOC1Q9H4F8 434 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 CNGB3Q9NQW8 809 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 ABCC13Q9NSE7 274 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 PLK2Q9NYY3 685 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 AGO1Q9UL18 857 aaKnown RBP11.24□□□□□ -0.61
PVT1-209ENST00000520913 INVSQ9Y283 1065 aa11.24□□□□□ -0.61
PVT1-209ENST00000520913 HBS1LQ9Y450 684 aaKnown RBP11.24□□□□□ -0.61
PVT1-209ENST00000520913 PCDH15Q96QU1 1955 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 NCOR2Q9Y618 2525 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 DCDC2BA2VCK2 349 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 YJEFN3A6XGL0 299 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 PRRT4C9JH25 899 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 E7ENQ6 273 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 GFRA2O00451 464 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 CAVIN2O95810 425 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 LATS1O95835 1130 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 KLKB1P03952 638 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 LCP1P13796 627 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 BRD2P25440 801 aaKnown RBP11.23□□□□□ -0.61
PVT1-209ENST00000520913 DHPSP49366 369 aaPredicted RBP11.23□□□□□ -0.61
PVT1-209ENST00000520913 ZNF445P59923 1031 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 E2F5Q15329 346 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 TRIP4Q15650 581 aaPredicted RBP11.23□□□□□ -0.61
PVT1-209ENST00000520913 LPCAT2Q7L5N7 544 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 ANKS1BQ7Z6G8 1248 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 DENND1CQ8IV53 801 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 FMNL3Q8IVF7 1028 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 FAM217AQ8IXS0 508 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 IRGQQ8WZA9 623 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 GOLGA1Q92805 767 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 KAT5Q92993 513 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 GABRG3Q99928 467 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 EDEM2Q9BV94 578 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 SRRTQ9BXP5 876 aaKnown RBP11.23□□□□□ -0.61
PVT1-209ENST00000520913 INTS2Q9H0H0 1204 aaKnown RBP11.23□□□□□ -0.61
PVT1-209ENST00000520913 KIAA1468Q9P260 1216 aa11.23□□□□□ -0.61
PVT1-209ENST00000520913 FBXO10Q9UK96 956 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms