RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 MIS12Q9H081 205 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 RAB6CQ9H0N0 254 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 FAM204AQ9H8W3 233 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 DZANK1Q9NVP4 752 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 ADAM21Q9UKJ8 722 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 ATP8A1Q9Y2Q0 1164 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 REV3LO60673 3130 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 C2CD4BA6NLJ0 364 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 PAPSS1O43252 624 aaPredicted RBP8.31□□□□□ -1.08
CLK4-203ENST00000519583 RNF8O76064 485 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 TJP3O95049 919 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 GAS8O95995 478 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 KRT7P08729 469 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 PDGFRAP16234 1089 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 ACAT1P24752 427 aaKnown RBP8.31□□□□□ -1.08
CLK4-203ENST00000519583 VPS41P49754 854 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 ZNF143P52747 638 aaPredicted RBP8.31□□□□□ -1.08
CLK4-203ENST00000519583 MRPS5P82675 430 aaKnown RBP8.31□□□□□ -1.08
CLK4-203ENST00000519583 CDO1Q16878 200 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 AAK1Q2M2I8 961 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 C15orf59Q2T9L4 293 aaPredicted RBP8.31□□□□□ -1.08
CLK4-203ENST00000519583 TFDP3Q5H9I0 405 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 RARS2Q5T160 578 aaKnown RBP8.31□□□□□ -1.08
CLK4-203ENST00000519583 LILRA6Q6PI73 481 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 SYCE2Q6PIF2 218 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 SCUBE3Q8IX30 993 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 TOP6BLQ8N6T0 577 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 OR2W6PQ8NHA6 318 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 ATL2Q8NHH9 583 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 SLC2A14Q8TDB8 520 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 GRK7Q8WTQ7 553 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 MSLNLQ96KJ4 702 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 HOMER3Q9NSC5 361 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 DPP7Q9UHL4 492 aa8.31□□□□□ -1.08
CLK4-203ENST00000519583 WDR27A2RRH5 827 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 OR6C75A6NL08 312 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 C3orf70A6NLC5 250 aaPredicted RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 ATP2C2O75185 946 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 PPFIA2O75334 1257 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 HOXB8P17481 243 aaPredicted RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 WARSP23381 471 aaKnown RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 GBP1P32455 592 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 KCNQ1P51787 676 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 BCAT1P54687 386 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 COPS2P61201 443 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 PTK6Q13882 451 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 LEXMQ3ZCV2 418 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 TMEM110Q86TL2 294 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 ANKRD52Q8NB46 1076 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 OR10T2Q8NGX3 314 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 ATXN2LQ8WWM7 1075 aaKnown RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 HSPH1Q92598 858 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 PGLYRP2Q96PD5 576 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 PEBP4Q96S96 227 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 TMEM209Q96SK2 561 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 CNPY3Q9BT09 278 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 OXCT2Q9BYC2 517 aaPredicted RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 TXLNGYQ9BZA5 131 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 ASNSD1Q9NWL6 643 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 DDX43Q9NXZ2 648 aaKnown RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 FBXW11Q9UKB1 542 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 RFPL2O75678 378 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 CD48P09326 243 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 ELF1P32519 619 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 PTPN7P35236 360 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 DYNLT1P63172 113 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 ATP11AP98196 1134 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 SLC6A3Q01959 620 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 BST2Q10589 180 aaKnown RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 MTMR3Q13615 1198 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 TTMPQ5BVD1 217 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 CEP85LQ5SZL2 805 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 PTCRAQ6ISU1 281 aaPredicted RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 TMC5Q6UXY8 1006 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 PRUNE1Q86TP1 453 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 TMEM86AQ8N2M4 240 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 B3GALNT2Q8NCR0 500 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 ZNF461Q8TAF7 563 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 CLEC4CQ8WTT0 213 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 TNIP3Q96KP6 325 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 CFAP57Q96MR6 1250 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 RTP3Q9BQQ7 232 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 DNPEPQ9ULA0 475 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 USP18Q9UMW8 372 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 PLXNA3P51805 1871 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 GOLGA6CA6NDK9 693 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 GOLGA8KD6RF30 607 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 LIASO43766 372 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 TRUB2O95900 331 aaKnown RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 C8AP07357 584 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 GOLGA6DP0CG33 693 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 LCP1P13796 627 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 ADCY1Q08828 1119 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 CALCOCO2Q13137 446 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 ACAP1Q15027 740 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 CES5AQ6NT32 575 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 RNF19BQ6ZMZ0 732 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 SYDE1Q6ZW31 735 aaPredicted RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 SLC7A14Q8TBB6 771 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 STK32AQ8WU08 396 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms