RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 MAFAQ8NHW3 353 aaPredicted RBP7.1□□□□□ -1.27
PTPN12-213ENST00000519553 RMDN3Q96TC7 470 aa7.1□□□□□ -1.27
PTPN12-213ENST00000519553 GAR1Q9NY12 217 aaKnown RBP7.1□□□□□ -1.27
PTPN12-213ENST00000519553 FNDC1Q4ZHG4 1894 aaPredicted RBP7.09□□□□□ -1.27
PTPN12-213ENST00000519553 WIPF3A6NGB9 483 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 M0QZQ0 153 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 ACKR2O00590 384 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 TRIM38O00635 465 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 CTIFO43310 598 aaKnown RBP7.09□□□□□ -1.27
PTPN12-213ENST00000519553 MT-CO3P00414 261 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 ATF7P17544 494 aaPredicted RBP7.09□□□□□ -1.27
PTPN12-213ENST00000519553 KLRK1P26718 216 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 ALDH18A1P54886 795 aaKnown RBP7.09□□□□□ -1.27
PTPN12-213ENST00000519553 CFHR3Q02985 330 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 BLMHQ13867 455 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 SUMO4Q6EEV6 95 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 CCDC144NLQ6NUI1 221 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 ZNF788Q6ZQV5 615 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 CACNA2D3Q8IZS8 1091 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 C12orf76Q8N812 135 aaPredicted RBP7.09□□□□□ -1.27
PTPN12-213ENST00000519553 ATG16L2Q8NAA4 619 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 EID2BQ96D98 161 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 RITA1Q96K30 269 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 KATNAL1Q9BW62 490 aa7.09□□□□□ -1.27
PTPN12-213ENST00000519553 TP63Q9H3D4 680 aaPredicted RBP7.09□□□□□ -1.27
PTPN12-213ENST00000519553 ARHGEF17Q96PE2 2063 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-213ENST00000519553 PNMA6EA0A0J9YXQ4 647 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 TISP43B9A030 160 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 SMIM22K7EJ46 135 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 TMIGD3P0DMS9 266 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-213ENST00000519553 RAE1P78406 368 aaKnown RBP7.08□□□□□ -1.28
PTPN12-213ENST00000519553 BFSP2Q13515 415 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 ELF2Q15723 593 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 KRTAP5-3Q6L8H2 238 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 CCDC174Q6PII3 467 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 NTN5Q8WTR8 489 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-213ENST00000519553 OVCA2Q8WZ82 227 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 PAAF1Q9BRP4 392 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 TFCP2L1Q9NZI6 479 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 FZD4Q9ULV1 537 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 PCDHB2Q9Y5E7 798 aa7.08□□□□□ -1.28
PTPN12-213ENST00000519553 LINC01548A6NM66 108 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 H3BNC9 293 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 DNPH1O43598 174 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 ALADP13716 330 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 VEGFAP15692 232 aaPredicted RBP7.07□□□□□ -1.28
PTPN12-213ENST00000519553 GALNSP34059 522 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 GSTM5P46439 218 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 NANOS3P60323 173 aaKnown RBP7.07□□□□□ -1.28
PTPN12-213ENST00000519553 CCDC15Q0P6D6 951 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 SEMA3BQ13214 749 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 LARS2Q15031 903 aaKnown RBP7.07□□□□□ -1.28
PTPN12-213ENST00000519553 GRAMD1BQ3KR37 738 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 CCDC38Q502W7 563 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 PRAMEF17Q5VTA0 474 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 CHSY1Q86X52 802 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 NELL1Q92832 810 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 CINPQ9BW66 212 aaPredicted RBP7.07□□□□□ -1.28
PTPN12-213ENST00000519553 USP29Q9HBJ7 922 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 DACT1Q9NYF0 836 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 LRFN1Q9P244 771 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 SEMA5BQ9P283 1151 aa7.07□□□□□ -1.28
PTPN12-213ENST00000519553 CCDC187A0A096LP49 1063 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 MANSC4A6NHS7 340 aaPredicted RBP7.06□□□□□ -1.28
PTPN12-213ENST00000519553 BTBD19C9JJ37 291 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 POC1B-GALNT4F8VUJ3 575 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 TCEA3O75764 348 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 ZNF37AP17032 561 aaPredicted RBP7.06□□□□□ -1.28
PTPN12-213ENST00000519553 CHKAP35790 457 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 CSHL1Q14406 222 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 FAM187BQ17R55 369 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 TMEM119Q4V9L6 283 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 AWAT1Q58HT5 328 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 GALNT4Q8N4A0 578 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 FAM71DQ8N9W8 422 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 STT3BQ8TCJ2 826 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 HASPINQ8TF76 798 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 DPF1Q92782 380 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 MCRS1Q96EZ8 462 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 MAGEH1Q9H213 219 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 KCNK9Q9NPC2 374 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 GRHPRQ9UBQ7 328 aa7.06□□□□□ -1.28
PTPN12-213ENST00000519553 IFRD1O00458 451 aaPredicted RBP7.05□□□□□ -1.28
PTPN12-213ENST00000519553 FCHO1O14526 889 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 FYB1O15117 783 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 RBMXL2O75526 392 aaKnown RBP7.05□□□□□ -1.28
PTPN12-213ENST00000519553 RPP40O75818 363 aaKnown RBP7.05□□□□□ -1.28
PTPN12-213ENST00000519553 CER1O95813 267 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 C1RP00736 705 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 IGHMBP2P38935 993 aaKnown RBP7.05□□□□□ -1.28
PTPN12-213ENST00000519553 PNLIPRP1P54315 467 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 FOXO1Q12778 655 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 MFSD13AQ14CX5 517 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 P3H1Q32P28 736 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 TRIM60Q495X7 471 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 RINT1Q6NUQ1 792 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 C16orf89Q6UX73 402 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 SERPINA13PQ6UXR4 307 aa7.05□□□□□ -1.28
PTPN12-213ENST00000519553 ZNF782Q6ZMW2 699 aaPredicted RBP7.05□□□□□ -1.28
PTPN12-213ENST00000519553 DCDC5Q6ZRR9 648 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms