RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 GPR20Q99678 358 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 MEI4A8MW99 385 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 SPECC1L-ADORA2AF8WAN1 911 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 CRHR1P34998 444 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 PDK2Q15119 407 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 PAXIP1Q6ZW49 1069 aaPredicted RBP17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 MAP7D3Q8IWC1 876 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 SLC25A41Q8N5S1 370 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 STKLD1Q8NE28 680 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 GSDMBQ8TAX9 411 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 FAM172AQ8WUF8 416 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 EBNA1BP2Q99848 306 aaKnown RBP17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 MAGEB5Q9BZ81 275 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 VCXQ9H320 206 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 GBA2Q9HCG7 927 aaPredicted RBP17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 STK32BQ9NY57 414 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 SLC17A6Q9P2U8 582 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 SCOCQ9UIL1 159 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 TNFSF13BQ9Y275 285 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 PTPRFP10586 1907 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 LYPLA1O75608 230 aaPredicted RBP17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 TFE3P19532 575 aaPredicted RBP17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 ACTR3P61158 418 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 SATB1Q01826 763 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 SLC10A2Q12908 348 aaPredicted RBP17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 NBPF20Q3BBV1 942 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 PPP6R3Q5H9R7 873 aaPredicted RBP17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 TREML2Q5T2D2 321 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 MYLK4Q86YV6 388 aaPredicted RBP17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 MCUQ8NE86 351 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 MTBPQ96DY7 904 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 RILPQ96NA2 401 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 MMP19Q99542 508 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 PPP1R12CQ9BZL4 782 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 NR2E3Q9Y5X4 410 aa17.14■□□□□ 0.33
PCDHGA11-202ENST00000518882 SDR42E2A6NKP2 422 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 ITM2AO43736 263 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 AHCYL1O43865 530 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 GAS2O43903 313 aaKnown RBP17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 USP1O94782 785 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 GNAT1P11488 350 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 ADORA2AP29274 412 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 CACNA2D1P54289 1103 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 GBE1Q04446 702 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 STX3Q13277 289 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 TRMT5Q32P41 509 aaKnown RBP17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 SMYD5Q6GMV2 418 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 C16orf46Q6P387 395 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 OLFML1Q6UWY5 402 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 KHSRPQ92945 711 aaKnown RBP eCLIP17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 LRRC39Q96DD0 335 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 KLRG1Q96E93 195 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 HPDLQ96IR7 371 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 MAF1Q9H063 256 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 C2CD2Q9Y426 696 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 ZNF638Q14966 1978 aaKnown RBP17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 CITO14578 2027 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 SCN1AP35498 2009 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 SERPINA6P08185 405 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 CPOXP36551 454 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 CDK18Q07002 472 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 TUBB3Q13509 450 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 BOLA3Q53S33 107 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 EFCAB12Q6NXP0 572 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 PMF1Q6P1K2 205 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 LCLAT1Q6UWP7 414 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 ATG14Q6ZNE5 492 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 APLFQ8IW19 511 aaPredicted RBP17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 APBB2Q92870 758 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 PPP1R16BQ96T49 567 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 CYP3A43Q9HB55 503 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 XAB2Q9HCS7 855 aaKnown RBP17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 ANGPTL2Q9UKU9 493 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 EMCNQ9ULC0 261 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 PPM1HQ9ULR3 514 aa17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 BARX2Q9UMQ3 279 aaPredicted RBP17.13■□□□□ 0.33
PCDHGA11-202ENST00000518882 BIRC5O15392 142 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 LGR5O75473 907 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 GSTA2P09210 222 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 TGFB3P10600 412 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 RPS12P25398 132 aaKnown RBP17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 HDAC4P56524 1084 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 EN1Q05925 392 aaPredicted RBP17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 INCA1Q0VD86 236 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 WASHC5Q12768 1159 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 PRKG1Q13976 671 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 ZRSR2Q15696 482 aaKnown RBP17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 C1orf146Q5VVC0 180 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 LBX2Q6XYB7 198 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 SCUBE3Q8IX30 993 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 RAB3IL1Q8TBN0 382 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 DEPDC1BQ8WUY9 529 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 TTC1Q99614 292 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 APOL6Q9BWW8 343 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 NRDE2Q9H7Z3 1164 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 VRTNQ9H8Y1 702 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 PCDHA11Q9Y5I1 949 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 GJA3Q9Y6H8 435 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 F5H423 210 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms