RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 MIPP30301 263 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 CRHR1P34998 444 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 MXD4Q14582 209 aaPredicted RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 SMAD1Q15797 465 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TDRD10Q5VZ19 366 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 LPCAT4Q643R3 524 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 PATL1Q86TB9 770 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 FBXW8Q8N3Y1 598 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 SYTL5Q8TDW5 730 aaPredicted RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 FAM172AQ8WUF8 416 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TFB1MQ8WVM0 346 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TBCBQ99426 244 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 EPAS1Q99814 870 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 MED10Q9BTT4 135 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 C12orf65Q9H3J6 166 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TLE6Q9H808 572 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 GID8Q9NWU2 228 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 PRPF19Q9UMS4 504 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 PSMD13Q9UNM6 376 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 LZTS1Q9Y250 596 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 AK5Q9Y6K8 562 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TIMM44O43615 452 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 OATP04181 439 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 IVDP26440 423 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TM4SF1P30408 202 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 HMOX2P30519 316 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TMED10P49755 219 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 PRKAA2P54646 552 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 ABCE1P61221 599 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 PTK2BQ14289 1009 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 PDK1Q15118 436 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 KYAT1Q16773 422 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 ZFPM1Q8IX07 1006 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 PQLC1Q8N2U9 271 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 PCYOX1LQ8NBM8 494 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 RNF169Q8NCN4 708 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TNIP2Q8NFZ5 429 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 MECRQ9BV79 373 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 EBF3Q9H4W6 596 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 LRRC4Q9HBW1 653 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 WARS2Q9UGM6 360 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 RAB26Q9ULW5 256 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 AURKCQ9UQB9 309 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 SUPT3HO75486 399 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 VDRP11473 427 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 GP5P40197 560 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 CDK18Q07002 472 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 PDAP1Q13442 181 aaKnown RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 USP10Q14694 798 aaKnown RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 ARL13BQ3SXY8 428 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 TTC7BQ86TV6 843 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 UNC45BQ8IWX7 931 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 RNF149Q8NC42 400 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 OR6B3Q8NGW1 331 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 TRPC4APQ8TEL6 797 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 CDRT15Q96T59 188 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 ETNK2Q9NVF9 386 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 VTI1BQ9UEU0 232 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 SLC7A8Q9UHI5 535 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 KIAA1257Q9ULG3 409 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 RPS6KL1Q9Y6S9 549 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 MYPNQ86TC9 1320 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 POLRMTO00411 1230 aaKnown RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 NFIBO00712 420 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 XPOTO43592 962 aaKnown RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 TRIM13O60858 407 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 GRAP2O75791 330 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 SEC24DO94855 1032 aaPredicted RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 MPOP05164 745 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 CCDC166P0CW27 439 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 PHKA2P46019 1235 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 NOVP48745 357 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 SOX10P56693 466 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 ZC3H12AQ5D1E8 599 aaKnown RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 FAM182BQ5T319 152 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 UBAP2Q5T6F2 1119 aaKnown RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 GRTP1Q5TC63 336 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 ANKRD22Q5VYY1 191 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 CGB2Q6NT52 195 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 SNX32Q86XE0 403 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 SIX6OS1Q8N1H7 587 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 ZNF786Q8N393 782 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 ADCY4Q8NFM4 1077 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 UTP4Q969X6 686 aaKnown RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 SKA1Q96BD8 255 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 ZNF669Q96BR6 464 aaPredicted RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 PPP1R14BQ96C90 147 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 PTCD3Q96EY7 689 aaKnown RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 SERAC1Q96JX3 654 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 FAR2Q96K12 515 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 TMEM79Q9BSE2 394 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 MRIQ9BWK5 157 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 COPS7BQ9H9Q2 264 aaPredicted RBP6.86□□□□□ -1.31
CPNE3-203ENST00000517490 CDH22Q9UJ99 828 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 STAP1Q9ULZ2 295 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 ORC6Q9Y5N6 252 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 SNX13Q9Y5W8 968 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 SNX5Q9Y5X3 404 aa6.86□□□□□ -1.31
CPNE3-203ENST00000517490 UBIAD1Q9Y5Z9 338 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms