RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ZNF184Q99676 751 aaPredicted RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 XAB2Q9HCS7 855 aaKnown RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 FBXO6Q9NRD1 293 aaPredicted RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 ARL8BQ9NVJ2 186 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 CYB561D2O14569 222 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 NDUFS3O75489 264 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 ASMTLO95671 621 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 TPBGLP0DKB5 382 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 CCNB1P14635 433 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 PNPLA4P41247 253 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 ELK3P41970 407 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 GCLCP48506 637 aaPredicted RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 PDAP1Q13442 181 aaKnown RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 PDCD2Q16342 344 aaPredicted RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 C6orf10Q5SRN2 563 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 LRRC8EQ6NSJ5 796 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 HELQQ8TDG4 1101 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 TFB1MQ8WVM0 346 aaKnown RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 APOPT1Q96IL0 206 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 MUC3BQ9H195 1237 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 TAGLN3Q9UI15 199 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 SLC4A7Q9Y6M7 1214 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 MROH7Q68CQ1 1323 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 AIM2O14862 343 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 AKAP5P24588 427 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 SERPINB9P50453 376 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 MPP2Q14168 576 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 TLDC1Q6P9B6 456 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 ANO5Q75V66 913 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 TMPRSS6Q8IU80 811 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 GTF3C2Q8WUA4 911 aaPredicted RBP11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 TMA16Q96EY4 203 aaKnown RBP11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 TMEM176AQ96HP8 235 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 USP18Q9UMW8 372 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 AURKCQ9UQB9 309 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 FARP1Q9Y4F1 1045 aaPredicted RBP11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 KBTBD13C9JR72 458 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 TCN1P20061 433 aaPredicted RBP11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 FAAP100Q0VG06 881 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 ZNF398Q8TD17 642 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 VCPIP1Q96JH7 1222 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 ING2Q9H160 280 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 C12orf65Q9H3J6 166 aaKnown RBP11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 GRID1Q9ULK0 1009 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 FAM237BA0A1B0GVD1 139 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 SYNDIG1LA6NDD5 238 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 SOCS7O14512 581 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 EDIL3O43854 480 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 PEX11AO75192 247 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 GLRA2P23416 452 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 LAMB3Q13751 1172 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 BMPR2Q13873 1038 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 RBBP7Q16576 425 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 TRMT5Q32P41 509 aaKnown RBP11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 C12orf56Q8IXR9 622 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 DCP1BQ8IZD4 617 aaKnown RBP11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 CEP70Q8NHQ1 597 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 FAM136AQ96C01 138 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 TRIM54Q9BYV2 358 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 SNTG2Q9NY99 539 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 WRAP73Q9P2S5 460 aaPredicted RBP11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 SLC17A7Q9P2U7 560 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 ZNF212Q9UDV6 495 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 WARS2Q9UGM6 360 aaKnown RBP11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 PPP2R3BQ9Y5P8 575 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 SLC30A1Q9Y6M5 507 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 CACNA1SQ13698 1873 aa11.17□□□□□ -0.62
PCDHGA1-202ENST00000517417 TGFB3P10600 412 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 PSEN1P49768 467 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 TMED1Q13445 227 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 DGKZQ13574 1117 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 GALNTL6Q49A17 601 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 WDR49Q8IV35 697 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 DNERQ8NFT8 737 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 DTNBP1Q96EV8 351 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 RPRD1AQ96P16 312 aaPredicted RBP11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 CEP41Q9BYV8 373 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 ETAA1Q9NY74 926 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 THEGQ9P2T0 379 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 RPL26L1Q9UNX3 145 aaKnown RBP11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 WNK3Q9BYP7 1800 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 ALOX15BO15296 676 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 ACAT1P24752 427 aaKnown RBP11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 TTC23LQ6PF05 361 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 CCDC60Q8IWA6 550 aaPredicted RBP11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 SH3KBP1Q96B97 665 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 SRPK1Q96SB4 655 aaKnown RBP11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 CNPY3Q9BT09 278 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 CASS4Q9NQ75 786 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 SLC13A4Q9UKG4 626 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 MRPL42Q9Y6G3 142 aaKnown RBP11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 MEI4A8MW99 385 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 TCEA3O75764 348 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 DGKIO75912 1065 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 TGM2P21980 687 aa11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 RPL7AP62424 266 aaKnown RBP11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 ROR2Q01974 943 aaKnown RBP11.16□□□□□ -0.62
PCDHGA1-202ENST00000517417 KHDC1Q4VXA5 237 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms