RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 hCG_1807616A0A1W2PRN6 198 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TCAF2A6NFQ2 919 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TSPY2A6NKD2 308 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ZAR1LA6NP61 321 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 P4HA2O15460 535 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SEPT4O43236 478 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 GJB3O75712 270 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SGPL1O95470 568 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 STARD3NLO95772 234 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 DNTTP04053 509 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 HLA-DOAP06340 250 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 WEE2P0C1S8 567 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TSPY3P0CV98 308 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TSPY8P0CW00 308 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TMEM225BP0DP42 221 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MED14OSP0DP75 135 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ACADMP11310 421 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ACP5P13686 325 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CHN1P15882 459 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PORP16435 677 aaPredicted RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PRKCHP24723 683 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 EPHA8P29322 1005 aaPredicted RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MLH1P40692 756 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RABGGTBP53611 331 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RCAN1P53805 252 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SLURP1P55000 103 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 EIF4A1P60842 406 aaKnown RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RPL15P61313 204 aaKnown RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PPP2CBP62714 309 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PPP2CAP67775 309 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TSPY1Q01534 308 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 KIAA2012Q0VF49 1180 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 EIF2B5Q13144 721 aaKnown RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MPP3Q13368 585 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 DCTN2Q13561 401 aaKnown RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 EIF4A2Q14240 407 aaKnown RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CLCA4Q14CN2 919 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBCCQ15814 346 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBRG1Q3YBR2 411 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D10BQ4KMP7 808 aaPredicted RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RILPL1Q5EBL4 403 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ARTNQ5T4W7 220 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 UBAP2Q5T6F2 1119 aaKnown RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 FAM90A2PQ658T7 463 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 GRHL2Q6ISB3 625 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 C16orf89Q6UX73 402 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 KIAA1324Q6UXG2 1013 aaKnown RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RINLQ6ZS11 566 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 LRRC55Q6ZSA7 311 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MICALCLQ6ZW33 695 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 P3H2Q8IVL5 708 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MAPKAPK5Q8IW41 473 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CNTROBQ8N137 903 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 FAM109AQ8N4B1 249 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 LSM14AQ8ND56 463 aaKnown RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SLC2A12Q8TD20 617 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CLEC4CQ8WTT0 213 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NPIPB3Q92617 1050 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NELL1Q92832 810 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CUL5Q93034 780 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ARRDC3Q96B67 414 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 FAM136AQ96C01 138 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ELP4Q96EB1 424 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PIGSQ96S52 555 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PAAF1Q9BRP4 392 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CLPBQ9H078 707 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MROH8Q9H579 483 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NRDE2Q9H7Z3 1164 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SEC61A2Q9H9S3 476 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MSL2Q9HCI7 577 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PLSCR4Q9NRQ2 329 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 FBXO28Q9NVF7 368 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TMLHEQ9NVH6 421 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RNF181Q9P0P0 153 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 STEAP1Q9UHE8 339 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NOL7Q9UMY1 257 aaKnown RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SMG5Q9UPR3 1016 aaKnown RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 GDAQ9Y2T3 454 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NEU2Q9Y3R4 380 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PCDHB2Q9Y5E7 798 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PSAT1Q9Y617 370 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SPATA31A3Q5VYP0 1347 aa3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RSF1Q96T23 1441 aaPredicted RBP3.6□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D3DA0A087WVF3 549 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D3IA0A087WXS9 549 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D3EA0A087X179 549 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D3KA0A087X1G2 549 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 A0A1W2PS29 197 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MYADML2A6NDP7 307 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D3BA6NDS4 549 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D3FA6NER0 549 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CAPN14A8MX76 684 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D3LB9A6J9 549 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CA12O43570 354 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TRIAP1O43715 76 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 DHX16O60231 1041 aaKnown RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NOBOXO60393 691 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RPS6KA4O75676 772 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 KRT1P04264 644 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CLEC3BP05452 202 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms