RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 AP3M2P53677 418 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 MFAP3P55082 362 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 TNNC1P63316 161 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 GCNT1Q02742 428 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 GRB14Q14449 540 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 RPS6KA1Q15418 735 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 MINDY4Q4G0A6 757 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 CBWD6Q4V339 395 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 CBWD3Q5JTY5 395 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 CBWD5Q5RIA9 395 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 BROXQ5VW32 411 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 EMBQ6PCB8 327 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 TSHZ1Q6ZSZ6 1077 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 ANKRD35Q8N283 1001 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 GPD1LQ8N335 351 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 LRRC57Q8N9N7 239 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 NOA1Q8NC60 698 aaKnown RBP8.73□□□□□ -1.01
SFXN1-211ENST00000515736 SHCBP1Q8NEM2 672 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 LMO3Q8TAP4 145 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 ACTRT1Q8TDG2 376 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 PARD3BQ8TEW8 1205 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 CTNNBL1Q8WYA6 563 aaPredicted RBP8.73□□□□□ -1.01
SFXN1-211ENST00000515736 MEGF10Q96KG7 1140 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 CDIP1Q9H305 208 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 MROH8Q9H579 483 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 DHX33Q9H6R0 707 aaKnown RBP8.73□□□□□ -1.01
SFXN1-211ENST00000515736 ZNF302Q9NR11 478 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 NRBP2Q9NSY0 501 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 MTMR10Q9NXD2 777 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 HDAC6Q9UBN7 1215 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 ATP11BQ9Y2G3 1177 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 STYXL1Q9Y6J8 313 aa8.73□□□□□ -1.01
SFXN1-211ENST00000515736 ZNF233A6NK53 670 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 MIF4GDA9UHW6 222 aaKnown RBP8.72□□□□□ -1.01
SFXN1-211ENST00000515736 KBTBD13C9JR72 458 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 HNRNPDLO14979 420 aaKnown RBP8.72□□□□□ -1.01
SFXN1-211ENST00000515736 SLC16A4O15374 487 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 MTA2O94776 668 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 HOXC6P09630 235 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 RHOXF2BP0C7M4 288 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 TPP2P29144 1249 aaPredicted RBP8.72□□□□□ -1.01
SFXN1-211ENST00000515736 ADORA2AP29274 412 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 EFNA5P52803 228 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 POLGP54098 1239 aaPredicted RBP8.72□□□□□ -1.01
SFXN1-211ENST00000515736 EPHB4P54760 987 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 PCBP3P57721 371 aaKnown RBP8.72□□□□□ -1.01
SFXN1-211ENST00000515736 BPIFB4P59827 614 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 VSNL1P62760 191 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 CBX1P83916 185 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 PURAQ00577 322 aaKnown RBP8.72□□□□□ -1.01
SFXN1-211ENST00000515736 LSAMPQ13449 338 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 ADGRE1Q14246 886 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 EMC2Q15006 297 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 CRY1Q16526 586 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 HSP90B2PQ58FF3 399 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 GJC2Q5T442 439 aaPredicted RBP8.72□□□□□ -1.01
SFXN1-211ENST00000515736 C11orf63Q6NUN7 778 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 SWSAP1Q6NVH7 229 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 C8orf74Q6P047 294 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 METTL7BQ6UX53 244 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 BEND4Q6ZU67 534 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 TSPYL5Q86VY4 417 aaPredicted RBP8.72□□□□□ -1.01
SFXN1-211ENST00000515736 ZNF677Q86XU0 584 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 CPNE8Q86YQ8 564 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 ARRDC4Q8NCT1 418 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 FBXL13Q8NEE6 735 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 TCP11Q8WWU5 503 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 CAPZA3Q96KX2 299 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 PTCHD1Q96NR3 888 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 NT5C1BQ96P26 610 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 PNKPQ96T60 521 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 RHOXF2Q9BQY4 288 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 SPATC1LQ9H0A9 340 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 TRIT1Q9H3H1 467 aaKnown RBP8.72□□□□□ -1.01
SFXN1-211ENST00000515736 CATSPERZQ9NTU4 200 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 AP5S1Q9NUS5 200 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 FBXL7Q9UJT9 491 aa8.72□□□□□ -1.01
SFXN1-211ENST00000515736 SZT2Q5T011 3432 aa8.71□□□□□ -1.01
SFXN1-211ENST00000515736 PGRMC1O00264 195 aaKnown RBP8.71□□□□□ -1.02
SFXN1-211ENST00000515736 DDX3XO00571 662 aaKnown RBP eCLIP8.71□□□□□ -1.02
SFXN1-211ENST00000515736 STRNO43815 780 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 CREB3O43889 395 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 EXTL3O43909 919 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 SRGAP2O75044 1071 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 RTN2O75298 545 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 TRIM49P0CI25 452 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 TRIM49CP0CI26 452 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 CYBAP13498 195 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 AARSP49588 968 aaKnown RBP eCLIP8.71□□□□□ -1.02
SFXN1-211ENST00000515736 POU5F1Q01860 360 aaKnown RBP8.71□□□□□ -1.02
SFXN1-211ENST00000515736 APBA1Q02410 837 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 CYP24A1Q07973 514 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 SMC1AQ14683 1233 aaKnown RBP8.71□□□□□ -1.02
SFXN1-211ENST00000515736 MBTPS1Q14703 1052 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 CASP8Q14790 479 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 ODF1Q14990 250 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 PSMD6Q15008 389 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 SURF1Q15526 300 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 TERF2Q15554 542 aa8.71□□□□□ -1.02
SFXN1-211ENST00000515736 PLA2G4FQ68DD2 849 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms