RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 PCDHGA2Q9Y5H1 932 aa16.47■□□□□ 0.23
SERF1B-208ENST00000515588 FAM186AA6NE01 2351 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 E5RJQ4 531 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 PAPSS1O43252 624 aaPredicted RBP16.46■□□□□ 0.23
SERF1B-208ENST00000515588 MSI1O43347 362 aaKnown RBP16.46■□□□□ 0.23
SERF1B-208ENST00000515588 KAT7O95251 611 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 LTFP02788 710 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 COPB1P53618 953 aaKnown RBP16.46■□□□□ 0.23
SERF1B-208ENST00000515588 SEC13P55735 322 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 PTK2Q05397 1052 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 KDSRQ06136 332 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 PDCLQ13371 301 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 PPP2R5DQ14738 602 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 TRIP4Q15650 581 aaPredicted RBP16.46■□□□□ 0.23
SERF1B-208ENST00000515588 ANO6Q4KMQ2 910 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 MSANTD2Q6P1R3 559 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 APTXQ7Z2E3 356 aaKnown RBP16.46■□□□□ 0.23
SERF1B-208ENST00000515588 TMEM110Q86TL2 294 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 DENND1CQ8IV53 801 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 PASD1Q8IV76 773 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 USP33Q8TEY7 942 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 RNF139Q8WU17 664 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 ATRIPQ8WXE1 791 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 GANQ9H2C0 597 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 ARHGEF4Q9NR80 690 aa16.46■□□□□ 0.23
SERF1B-208ENST00000515588 LIMA1Q9UHB6 759 aaKnown RBP16.46■□□□□ 0.23
SERF1B-208ENST00000515588 HBS1LQ9Y450 684 aaKnown RBP16.46■□□□□ 0.23
SERF1B-208ENST00000515588 OTOGLQ3ZCN5 2332 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 GVINP1Q7Z2Y8 2422 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 NEDD8-MDP1E9PL57 170 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 EPHB6O15197 1021 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 ATG13O75143 517 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 TYRP14679 529 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 HOXA6P31267 233 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 GRIA2P42262 883 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 ACADSBP45954 432 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 FNTBP49356 437 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 C2orf27AQ580R0 203 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 EMC10Q5UCC4 262 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 HEATR6Q6AI08 1181 aaKnown RBP16.45■□□□□ 0.22
SERF1B-208ENST00000515588 AOPEPQ8N6M6 819 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 SUMF1Q8NBK3 374 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 BHMTQ93088 406 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 PLD4Q96BZ4 506 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 CPXM1Q96SM3 734 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 BBS2Q9BXC9 721 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 DCLK3Q9C098 648 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 LHX5Q9H2C1 402 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 SEMA4AQ9H3S1 761 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 PLCB1Q9NQ66 1216 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 ZNF510Q9Y2H8 683 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 SIK3Q9Y2K2 1263 aa16.45■□□□□ 0.22
SERF1B-208ENST00000515588 ZNF292O60281 2723 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 LRRC10BA6NIK2 292 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.44■□□□□ 0.22
SERF1B-208ENST00000515588 CACNG3O60359 315 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 LMNAP02545 664 aaKnown RBP16.44■□□□□ 0.22
SERF1B-208ENST00000515588 APODP05090 189 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 ATP1A3P13637 1013 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 KIR2DL1P43626 348 aaPredicted RBP16.44■□□□□ 0.22
SERF1B-208ENST00000515588 PXNP49023 591 aaPredicted RBP16.44■□□□□ 0.22
SERF1B-208ENST00000515588 NRLP54845 237 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 FYB2Q5VWT5 728 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 SYT13Q7L8C5 426 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 DHX40Q8IX18 779 aaKnown RBP16.44■□□□□ 0.22
SERF1B-208ENST00000515588 PIWIL1Q96J94 861 aaKnown RBP16.44■□□□□ 0.22
SERF1B-208ENST00000515588 FUCA2Q9BTY2 467 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 STK33Q9BYT3 514 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 PLK2Q9NYY3 685 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 WDR35Q9P2L0 1181 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 DEC1Q9P2X7 70 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 HCN2Q9UL51 889 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 NAALADL1Q9UQQ1 740 aa16.44■□□□□ 0.22
SERF1B-208ENST00000515588 KIAA1549LQ6ZVL6 1849 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 LGALS16A8MUM7 142 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 F8VZ95 297 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 HRO43593 1189 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 PENKP01210 267 aaPredicted RBP16.43■□□□□ 0.22
SERF1B-208ENST00000515588 IGLV3-27P01718 113 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 CISD3P0C7P0 127 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 NCAM1P13591 858 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 CYP11B1P15538 503 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 KRT9P35527 623 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 TNFRSF4P43489 277 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 SRSF5Q13243 272 aaKnown RBP16.43■□□□□ 0.22
SERF1B-208ENST00000515588 DMC1Q14565 340 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 TAF5Q15542 800 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 SYPL2Q5VXT5 272 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 TOGARAM2Q6ZUX3 1019 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 FAM217AQ8IXS0 508 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 CCDC33Q8N5R6 958 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 TERB1Q8NA31 727 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 C1orf131Q8NDD1 294 aaKnown RBP16.43■□□□□ 0.22
SERF1B-208ENST00000515588 DQX1Q8TE96 717 aaKnown RBP16.43■□□□□ 0.22
SERF1B-208ENST00000515588 DDX1Q92499 740 aaKnown RBP16.43■□□□□ 0.22
SERF1B-208ENST00000515588 FAM149B1Q96BN6 582 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 PPP1R13BQ96KQ4 1090 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 HHIPQ96QV1 700 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 ZDHHC4Q9NPG8 344 aa16.43■□□□□ 0.22
SERF1B-208ENST00000515588 FAM207AQ9NSI2 230 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms