RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 EXOC3L4Q17RC7 722 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 EOGTQ5NDL2 527 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 GJB7Q6PEY0 223 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 CACNA2D4Q7Z3S7 1137 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 DENND1CQ8IV53 801 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 FMNL3Q8IVF7 1028 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 PLD4Q96BZ4 506 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 HSFY1Q96LI6 401 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 ZDHHC4Q9NPG8 344 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 APEX2Q9UBZ4 518 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 AGO1Q9UL18 857 aaKnown RBP25.63■■□□□ 1.69
SNF8-213ENST00000514929 GTPBP10A4D1E9 387 aaKnown RBP25.62■■□□□ 1.69
SNF8-213ENST00000514929 MED7O43513 233 aa25.62■■□□□ 1.69
SNF8-213ENST00000514929 SPEM2Q0P670 501 aa25.62■■□□□ 1.69
SNF8-213ENST00000514929 ARHGAP44Q17R89 818 aa25.62■■□□□ 1.69
SNF8-213ENST00000514929 ANO7Q6IWH7 933 aa25.62■■□□□ 1.69
SNF8-213ENST00000514929 ZNF513Q8N8E2 541 aaPredicted RBP25.62■■□□□ 1.69
SNF8-213ENST00000514929 KCNV2Q8TDN2 545 aa25.62■■□□□ 1.69
SNF8-213ENST00000514929 IRGQQ8WZA9 623 aa25.62■■□□□ 1.69
SNF8-213ENST00000514929 GOLGA1Q92805 767 aa25.62■■□□□ 1.69
SNF8-213ENST00000514929 PLK2Q9NYY3 685 aa25.62■■□□□ 1.69
SNF8-213ENST00000514929 SGK1O00141 431 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 GABBR2O75899 941 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 ALDH1A2O94788 518 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 LETM1O95202 739 aaPredicted RBP25.61■■□□□ 1.69
SNF8-213ENST00000514929 USP8P40818 1118 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 DGKGP49619 791 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 MAN2A1Q16706 1144 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 TMEM92Q6UXU6 159 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 TRMT11Q7Z4G4 463 aaKnown RBP25.61■■□□□ 1.69
SNF8-213ENST00000514929 KBTBD6Q86V97 674 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 TPSD1Q9BZJ3 242 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 MIS12Q9H081 205 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 POLMQ9NP87 494 aaPredicted RBP25.61■■□□□ 1.69
SNF8-213ENST00000514929 ST7Q9NRC1 585 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 SFMBT1Q9UHJ3 866 aa25.61■■□□□ 1.69
SNF8-213ENST00000514929 HBS1LQ9Y450 684 aaKnown RBP25.61■■□□□ 1.69
SNF8-213ENST00000514929 THAP12O43422 761 aa25.6■■□□□ 1.69
SNF8-213ENST00000514929 FBXO21O94952 628 aa25.6■■□□□ 1.69
SNF8-213ENST00000514929 CHRM1P11229 460 aaPredicted RBP25.6■■□□□ 1.69
SNF8-213ENST00000514929 PRKCSHP14314 528 aaPredicted RBP25.6■■□□□ 1.69
SNF8-213ENST00000514929 GNA15P30679 374 aa25.6■■□□□ 1.69
SNF8-213ENST00000514929 HARS2P49590 506 aaKnown RBP25.6■■□□□ 1.69
SNF8-213ENST00000514929 APBA1Q02410 837 aa25.6■■□□□ 1.69
SNF8-213ENST00000514929 HSP90AA4PQ58FG1 418 aa25.6■■□□□ 1.69
SNF8-213ENST00000514929 PARD6AQ9NPB6 346 aa25.6■■□□□ 1.69
SNF8-213ENST00000514929 EML5Q05BV3 1969 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 LRP3O75074 770 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 LTFP02788 710 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 CYBBP04839 570 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 PON1P27169 355 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 GPD2P43304 727 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 TRIP4Q15650 581 aaPredicted RBP25.59■■□□□ 1.69
SNF8-213ENST00000514929 USP39Q53GS9 565 aaKnown RBP25.59■■□□□ 1.69
SNF8-213ENST00000514929 DENND1BQ6P3S1 775 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 TOGARAM2Q6ZUX3 1019 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 RASSF3Q86WH2 238 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 CLEC4CQ8WTT0 213 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 ZNF606Q8WXB4 792 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 STARD13Q9Y3M8 1113 aa25.59■■□□□ 1.69
SNF8-213ENST00000514929 ADAM23O75077 832 aa25.58■■□□□ 1.69
SNF8-213ENST00000514929 PENKP01210 267 aaPredicted RBP25.58■■□□□ 1.69
SNF8-213ENST00000514929 HNRNPLP14866 589 aaKnown RBP eCLIP25.58■■□□□ 1.69
SNF8-213ENST00000514929 TGM1P22735 817 aa25.58■■□□□ 1.69
SNF8-213ENST00000514929 LMNB2Q03252 620 aa25.58■■□□□ 1.69
SNF8-213ENST00000514929 FYB2Q5VWT5 728 aa25.58■■□□□ 1.69
SNF8-213ENST00000514929 CPXM2Q8N436 756 aa25.58■■□□□ 1.69
SNF8-213ENST00000514929 MDGA1Q8NFP4 955 aa25.58■■□□□ 1.69
SNF8-213ENST00000514929 RMDN1Q96DB5 314 aa25.58■■□□□ 1.69
SNF8-213ENST00000514929 LOXL4Q96JB6 756 aa25.58■■□□□ 1.69
SNF8-213ENST00000514929 TUBGCP2Q9BSJ2 902 aa25.58■■□□□ 1.69
SNF8-213ENST00000514929 NDST4Q9H3R1 872 aa25.58■■□□□ 1.69
SNF8-213ENST00000514929 ACP6Q9NPH0 428 aa25.58■■□□□ 1.69
SNF8-213ENST00000514929 BCCIPQ9P287 314 aaKnown RBP eCLIP25.58■■□□□ 1.69
SNF8-213ENST00000514929 SPTBN4Q9H254 2564 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 BECN2A8MW95 431 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 GOLGA6L22H0YM25 854 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 DCLK1O15075 740 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 MSI1O43347 362 aaKnown RBP25.57■■□□□ 1.68
SNF8-213ENST00000514929 CISD3P0C7P0 127 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 ACADSBP45954 432 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 ELF2Q15723 593 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 MEA1Q16626 185 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 VWA3BQ502W6 1294 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 CT47A1Q5JQC4 288 aaPredicted RBP25.57■■□□□ 1.68
SNF8-213ENST00000514929 MSANTD2Q6P1R3 559 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 SCUBE3Q8IX30 993 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 DDI1Q8WTU0 396 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 SHC3Q92529 594 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 ZC3H10Q96K80 434 aaKnown RBP25.57■■□□□ 1.68
SNF8-213ENST00000514929 SEMA4GQ9NTN9 838 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 INVSQ9Y283 1065 aa25.57■■□□□ 1.68
SNF8-213ENST00000514929 PRRT4C9JH25 899 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 PES1O00541 588 aaKnown RBP25.56■■□□□ 1.68
SNF8-213ENST00000514929 SART1O43290 800 aaKnown RBP25.56■■□□□ 1.68
SNF8-213ENST00000514929 NTSR1P30989 418 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 GBP1P32455 592 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 WASP42768 502 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 PLK5Q496M5 336 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 EGFLAMQ63HQ2 1017 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms