RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 ARPP21Q9UBL0 812 aaPredicted RBP3.9□□□□□ -1.79
CALCOCO2-223ENST00000514267 C19orf53Q9UNZ5 99 aaPredicted RBP3.9□□□□□ -1.79
CALCOCO2-223ENST00000514267 SH2B3Q9UQQ2 575 aa3.9□□□□□ -1.79
CALCOCO2-223ENST00000514267 TBC1D30Q9Y2I9 924 aa3.9□□□□□ -1.79
CALCOCO2-223ENST00000514267 CCDC78A2IDD5 438 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 A6NLC8 198 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 B4E171 279 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 F5H0A9 414 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 H0Y3Z8 333 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 DHHO43323 396 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 DNPH1O43598 174 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 RGS10O43665 173 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 SNX2O60749 519 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 VPS4BO75351 444 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 DDX58O95786 925 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 POLBP06746 335 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 SRGAP2BP0DMP2 458 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 ARP10275 920 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 GATA3P23771 443 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 CD6P30203 668 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 TSPAN7P41732 249 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 ZNF134P52741 427 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 BCAT1P54687 386 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 LILRA4P59901 499 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 SLC10A2Q12908 348 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 MYO1EQ12965 1108 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 GPS1Q13098 491 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 BMPR2Q13873 1038 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 CCNIQ14094 377 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 PDE1CQ14123 709 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 BOP1Q14137 746 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 KCNAB1Q14722 419 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 CD300EQ496F6 205 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 CERCAMQ5T4B2 595 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 ZNF618Q5T7W0 954 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 MAP3K21Q5TCX8 1036 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 VPS53Q5VIR6 699 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 ZKSCAN2Q63HK3 967 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 TTLL5Q6EMB2 1281 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 ABLIM2Q6H8Q1 611 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 DSTYKQ6XUX3 929 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 PEG10Q86TG7 708 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 ARHGEF25Q86VW2 580 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 ZNF280BQ86YH2 543 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 CPOQ8IVL8 374 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 USP38Q8NB14 1042 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 OR1N1Q8NGS0 311 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 SCAMP5Q8TAC9 235 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 MYCBPAPQ8TBZ2 947 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 PPP2R3CQ969Q6 453 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 FKBP10Q96AY3 582 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 GRAMD1AQ96CP6 724 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 TRAPPC9Q96Q05 1148 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 HAPLN3Q96S86 360 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 SEMA4CQ9C0C4 833 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 TAF1DQ9H5J8 278 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 MRPS18AQ9NVS2 196 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 TMEM160Q9NX00 188 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 GGA3Q9NZ52 723 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 NDUFAF4Q9P032 175 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 LPAR3Q9UBY5 353 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 VPS51Q9UID3 782 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 DAPP1Q9UN19 280 aa3.89□□□□□ -1.79
CALCOCO2-223ENST00000514267 RNASEH2AO75792 299 aaKnown RBP3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 USP1O94782 785 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 ZFPL1O95159 310 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 CD4P01730 458 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 TFRCP02786 760 aaKnown RBP3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 PPP3CBP16298 524 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 CAPN3P20807 821 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 CNTFP26441 200 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 PRKAR1BP31321 381 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 PLA2G5P39877 138 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 PRKAG1P54619 331 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 TIAL1Q01085 375 aaKnown RBP eCLIP3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 CHRNDQ07001 517 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 MAPK7Q13164 816 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 CUL4BQ13620 913 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 E2F2Q14209 437 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 CLCA4Q14CN2 919 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 TXNRD1Q16881 649 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 ZIK1Q3SY52 487 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 TTC22Q5TAA0 569 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 NAA35Q5VZE5 725 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 TMEM108Q6UXF1 575 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 C4orf50Q6ZRC1 276 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 BBS12Q6ZW61 710 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 BRINP3Q76B58 766 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 ZNF551Q7Z340 670 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 WDR53Q7Z5U6 358 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 KCTD20Q7Z5Y7 419 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 SLC15A3Q8IY34 581 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 TMEM57Q8N5G2 664 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 AFG1LQ8WV93 481 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 CPT1BQ92523 772 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 LPIN2Q92539 896 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 TBC1D5Q92609 795 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 HTRA1Q92743 480 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 FAM136AQ96C01 138 aa3.88□□□□□ -1.79
CALCOCO2-223ENST00000514267 ZBTB10Q96DT7 871 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms