RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	NSMCE3	Q96MG7	304 aa		11.5	□□□□□ -0.57
PDCD6-210	ENST00000513582	ZNF341	Q9BYN7	854 aa		11.5	□□□□□ -0.57
PDCD6-210	ENST00000513582	SIAE	Q9HAT2	523 aa		11.5	□□□□□ -0.57
PDCD6-210	ENST00000513582		A0A1W2PPW3	197 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	ARHGEF37	A1IGU5	675 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	DCX	O43602	365 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	TKT	P29401	623 aa	Known RBP	11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	VAMP7	P51809	220 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	NRL	P54845	237 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	STX3	Q13277	289 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	ADGRE1	Q14246	886 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	FLOT2	Q14254	428 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	IGDCC3	Q8IVU1	814 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	WDR75	Q8IWA0	830 aa	Known RBP	11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	TFB1M	Q8WVM0	346 aa	Known RBP	11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	EME1	Q96AY2	570 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	CFAP36	Q96G28	342 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	FAM213A	Q9BRX8	229 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	KLC2	Q9H0B6	622 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	XAB2	Q9HCS7	855 aa	Known RBP	11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	ITGB4	P16144	1822 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	CSPG5	O95196	566 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	ATE1	O95260	518 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	ZNF12	P17014	697 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	PTPN1	P18031	435 aa	Known RBP	11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	CD247	P20963	164 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	RPA1	P27694	616 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	PKNOX1	P55347	436 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	BASP1	P80723	227 aa	Known RBP	11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	MRPS9	P82933	396 aa	Known RBP	11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	CTBS	Q01459	385 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	MTERF2	Q49AM1	385 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	BSPRY	Q5W0U4	402 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	MFSD7	Q6UXD7	560 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	MYO1H	Q8N1T3	1032 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	PHTF2	Q8N3S3	785 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	HPS1	Q92902	700 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	USP13	Q92995	863 aa	Predicted RBP	11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	CEP170P1	Q96L14	293 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	CCDC17	Q96LX7	622 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	EHMT1	Q9H9B1	1298 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	IGSF9	Q9P2J2	1179 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	RNF11	Q9Y3C5	154 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582		A6NL46	340 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	FBXO21	O94952	628 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	KRT1	P04264	644 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	PABPC1	P11940	636 aa	Known RBP	11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	RFX1	P22670	979 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	EPHA3	P29320	983 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	ARPC4	P59998	168 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	GNA12	Q03113	381 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	CIAPIN1	Q6FI81	312 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	DHRS4L2	Q6PKH6	230 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	ZBTB33	Q86T24	672 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	TMEM79	Q9BSE2	394 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	DHRS4	Q9BTZ2	278 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	SHOC2	Q9UQ13	582 aa		11.49	□□□□□ -0.57
PDCD6-210	ENST00000513582	TCRBV9S1A1T	A0A576	114 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	DGKI	O75912	1065 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	S100B	P04271	92 aa	Predicted RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	WEE2	P0C1S8	567 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	CD1E	P15812	388 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	ELK3	P41970	407 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	ACOT2	P49753	483 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	GDF10	P55107	478 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	ESRRG	P62508	458 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	TSPY1	Q01534	308 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	UTS2B	Q765I0	119 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	AGTPBP1	Q9UPW5	1226 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	AFG3L2	Q9Y4W6	797 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	MYH14	Q7Z406	1995 aa	Known RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582		A0A1W2PQ67	120 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	KBTBD13	C9JR72	458 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	SEC24D	O94855	1032 aa	Predicted RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	KLHL2	O95198	593 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	MAP3K6	O95382	1288 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	H6PD	O95479	791 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	P4HA1	P13674	534 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	NR4A1	P22736	598 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	EIF3E	P60228	445 aa	Known RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	TRIM16L	Q309B1	348 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	TEX44	Q53QW1	395 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	FGD3	Q5JSP0	725 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	PDPK2P	Q6A1A2	396 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	NIPAL1	Q6NVV3	410 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	NEPRO	Q6NW34	567 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	RMND5B	Q96G75	393 aa	Predicted RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	NACC1	Q96RE7	527 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	OSBPL10	Q9BXB5	764 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	CEP44	Q9C0F1	390 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	KLHL25	Q9H0H3	589 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	ZFYVE28	Q9HCC9	887 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	RAB20	Q9NX57	234 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms