RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 P3H4Q92791 437 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 PKNOX2Q96KN3 472 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 ZNF558Q96NG5 402 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 KCTD15Q96SI1 283 aaPredicted RBP25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 FOXP3Q9BZS1 431 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 PCDH9Q9HC56 1237 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 HSFX1Q9UBD0 423 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 ASIC3Q9UHC3 531 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 MTMR11A4FU01 709 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 RTN3O95197 1032 aaPredicted RBP25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 HAPLN1P10915 354 aaPredicted RBP25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 ATF2P15336 505 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 LAG3P18627 525 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 CDR1P51861 262 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 PLTPP55058 493 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 MTMR3Q13615 1198 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 ARL13BQ3SXY8 428 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 RSPO2Q6UXX9 243 aaPredicted RBP25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 GSTA5Q7RTV2 222 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 SCN4BQ8IWT1 228 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 SLC39A11Q8N1S5 342 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 GDAP1L1Q96MZ0 367 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 CSPG4P5Q96PW8 444 aa25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 PRDM5Q9NQX1 630 aaPredicted RBP25.28■■□□□ 1.64
SPOCK3-221ENST00000512648 MCF2LO15068 1137 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 TP73O15350 636 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 ADCY8P40145 1251 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 ARL4AP40617 200 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 EIF3EP60228 445 aaKnown RBP25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 DYNLT1P63172 113 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 XRCC4Q13426 336 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 EFHC2Q5JST6 749 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 TMC3Q7Z5M5 1100 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 SCD5Q86SK9 330 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 ATAD1Q8NBU5 361 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 TSEN2Q8NCE0 465 aaKnown RBP25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 FAM118BQ9BPY3 351 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 CWC15Q9P013 229 aaKnown RBP25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 STK39Q9UEW8 545 aa25.27■■□□□ 1.64
SPOCK3-221ENST00000512648 PATJQ8NI35 1801 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 H3BRJ5 948 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 VNN2O95498 520 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 SOD2P04179 222 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 CPB1P15086 417 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 PECAM1P16284 738 aaPredicted RBP25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 PBX3P40426 434 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 RPL10AP62906 217 aaKnown RBP25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 DEFB103AP81534 67 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 PPP6R3Q5H9R7 873 aaPredicted RBP25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 BTBD8Q5XKL5 378 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 BZW1Q7L1Q6 419 aaKnown RBP25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 FBXO22Q8NEZ5 403 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 DQX1Q8TE96 717 aaKnown RBP25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 B3GALT6Q96L58 329 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 VN1R3Q9BXE9 311 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 MED4Q9NPJ6 270 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 DDIT4Q9NX09 232 aa25.26■■□□□ 1.63
SPOCK3-221ENST00000512648 VWA8A3KMH1 1905 aa25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 CFAP69A5D8W1 941 aa25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 RBP3P10745 1247 aa25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 PSEN1P49768 467 aa25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 SEMA3BQ13214 749 aa25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 NME3Q13232 169 aa25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 SLMAPQ14BN4 828 aa25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 HAUS1Q96CS2 278 aa25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 HERC2P3Q9BVR0 1158 aa25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 SMOC2Q9H3U7 446 aa25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 SAE1Q9UBE0 346 aaPredicted RBP25.25■■□□□ 1.63
SPOCK3-221ENST00000512648 BCLAF3A2AJT9 711 aaKnown RBP25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 DSG1Q02413 1049 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 DDR2Q16832 855 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 BRMS1LQ5PSV4 323 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 MSANTD2Q6P1R3 559 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 RNF19BQ6ZMZ0 732 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 EDEM1Q92611 657 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 RTP4Q96DX8 246 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 TMEM121Q9BTD3 319 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 OSBPL2Q9H1P3 480 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 WDCPQ9H6R7 721 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 FAM204AQ9H8W3 233 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 CLIC5Q9NZA1 410 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 SPG21Q9NZD8 308 aa25.24■■□□□ 1.63
SPOCK3-221ENST00000512648 GOLGA6BA6NDN3 693 aa25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 DHX9Q08211 1270 aaKnown RBP25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 PPIGQ13427 754 aaKnown RBP eCLIP25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 BTG3Q14201 252 aaPredicted RBP25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 PSMD5Q16401 504 aa25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 HIBCHQ6NVY1 386 aaPredicted RBP25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 LRIG3Q6UXM1 1119 aa25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 CEP128Q6ZU80 1094 aa25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 DENND5BQ6ZUT9 1274 aa25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 PCGF5Q86SE9 256 aa25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 DDX53Q86TM3 631 aaKnown RBP25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 TAC4Q86UU9 113 aa25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 RNF139Q8WU17 664 aa25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 RIN2Q8WYP3 895 aaPredicted RBP25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 PGLYRP2Q96PD5 576 aa25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 ARHGEF38Q9NXL2 777 aa25.23■■□□□ 1.63
SPOCK3-221ENST00000512648 ANAPC5Q9UJX4 755 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms