RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 NPTXRO95502 500 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 PGK2P07205 417 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 BPGMP07738 259 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 PAPOLAP51003 745 aaKnown RBP9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 FASTKD1Q53R41 847 aaKnown RBP9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 EFCAB12Q6NXP0 572 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 DENND5BQ6ZUT9 1274 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 TRIM42Q8IWZ5 723 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 CPB2Q96IY4 423 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 SIGLEC10Q96LC7 697 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 CEP41Q9BYV8 373 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 DHX35Q9H5Z1 703 aaKnown RBP9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 ZNF212Q9UDV6 495 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 HBS1LQ9Y450 684 aaKnown RBP9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 TM7SF2O76062 418 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 SESN2P58004 480 aaPredicted RBP9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 PMF1Q6P1K2 205 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 PYDC1Q8WXC3 89 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 LPIN3Q9BQK8 851 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 PTPRHQ9HD43 1115 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 STK32BQ9NY57 414 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 MAGEC1O60732 1142 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 PDE5AO76074 875 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 F7P08709 466 aaPredicted RBP9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 VDRP11473 427 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 PRKCHP24723 683 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 RAP1GDS1P52306 607 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 CMPK2Q5EBM0 449 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 RALGPS1Q5JS13 557 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 TSHZ1Q6ZSZ6 1077 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 PGLYRP2Q96PD5 576 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 PNPLA8Q9NP80 782 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 NDE1Q9NXR1 346 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 BTBD7Q9P203 1132 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 ANGPTL2Q9UKU9 493 aa9.58□□□□□ -0.88
LIMCH1-215ENST00000512632 SDC4P31431 198 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 SLC10A2Q12908 348 aaPredicted RBP9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 PEX6Q13608 980 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 BOLA3Q53S33 107 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 CES3Q6UWW8 571 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 METTL7BQ6UX53 244 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 C7orf31Q8N865 590 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 DNERQ8NFT8 737 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 EBNA1BP2Q99848 306 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 XAB2Q9HCS7 855 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 A8MXQ7 604 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 ZBTB42B2RXF5 422 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 C19orf81C9J6K1 198 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 SARNPP82979 210 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 ACAP1Q15027 740 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 FOXB2Q5VYV0 432 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 KCNT2Q6UVM3 1135 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 ACOT1Q86TX2 421 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 CNKSR2Q8WXI2 1034 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 KCNN1Q92952 543 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 FZD8Q9H461 694 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 WDR27A2RRH5 827 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 TRDMT1O14717 391 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 ZMPSTE24O75844 475 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 FESP07332 822 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 ACTR3P61158 418 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 TEX44Q53QW1 395 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 PPM1JQ5JR12 505 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 N4BP2L1Q5TBK1 243 aaPredicted RBP9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 VWA5B1Q5TIE3 1220 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 WDR75Q8IWA0 830 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 GATA6Q92908 595 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 CCDC106Q9BWC9 280 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 ZCWPW1Q9H0M4 648 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 C2orf40Q9H1Z8 148 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 ZNF180Q9UJW8 692 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 PACSIN3Q9UKS6 424 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 PLA2G4CQ9UP65 541 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 MFHAS1Q9Y4C4 1052 aa9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 MYO18AQ92614 2054 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-215ENST00000512632 MAGEA13PA6NCF6 341 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 LGR5O75473 907 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 CYP2F1P24903 491 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 RXRBP28702 533 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 GOLGA7BQ2TAP0 167 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 TREML2Q5T2D2 321 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 ZNF534Q76KX8 674 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 GSDMBQ8TAX9 411 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 SLC26A7Q8TE54 656 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 GBP5Q96PP8 586 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 PNPOQ9NVS9 261 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 A0A087WZ62 844 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 AHCYL1O43865 530 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 AP1G2O75843 785 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 PROZP22891 400 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 GABRB2P47870 512 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 AP2B1P63010 937 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 PDE1BQ01064 536 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 TRMT5Q32P41 509 aaKnown RBP9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 SLC10A6Q3KNW5 377 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 PPP1R26Q5T8A7 1209 aaPredicted RBP9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 DPY19L2Q6NUT2 758 aa9.56□□□□□ -0.88
LIMCH1-215ENST00000512632 ATXN7L3BQ96GX2 97 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms