RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 SPATA20Q8TB22 786 aa8.19□□□□□ -1.1
DEPDC1B-205ENST00000512078 PRR11Q96HE9 360 aaPredicted RBP8.19□□□□□ -1.1
DEPDC1B-205ENST00000512078 ZNF560Q96MR9 790 aa8.19□□□□□ -1.1
DEPDC1B-205ENST00000512078 ZNF768Q9H5H4 540 aaKnown RBP8.19□□□□□ -1.1
DEPDC1B-205ENST00000512078 ERVMER34-1Q9H9K5 563 aa8.19□□□□□ -1.1
DEPDC1B-205ENST00000512078 L1RE1Q9UN81 338 aa8.19□□□□□ -1.1
DEPDC1B-205ENST00000512078 RP1P56715 2156 aa8.19□□□□□ -1.1
DEPDC1B-205ENST00000512078 RP1L1Q8IWN7 2480 aaPredicted RBP8.19□□□□□ -1.1
DEPDC1B-205ENST00000512078 SCN8AQ9UQD0 1980 aa8.19□□□□□ -1.1
DEPDC1B-205ENST00000512078 PTPRJQ12913 1337 aa8.19□□□□□ -1.1
DEPDC1B-205ENST00000512078 SPENQ96T58 3664 aaKnown RBP8.19□□□□□ -1.1
DEPDC1B-205ENST00000512078 A0A1W2PR77 199 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 COCHO43405 550 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 MAPTP10636 758 aaKnown RBP8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 ANXA13P27216 316 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 CDC25AP30304 524 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 CDH8P55286 799 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 TAF10Q12962 218 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 NCAPHQ15003 741 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 TBR1Q16650 682 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 KIAA0895LQ68EN5 471 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 OSTM1Q86WC4 334 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 TMEM161BQ8NDZ6 487 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 NSUN7Q8NE18 718 aaKnown RBP8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 OR2T3Q8NH03 318 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 UCMAQ8WVF2 138 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 TNFRSF25Q93038 417 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 HPS3Q969F9 1004 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 WBP2Q969T9 261 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 FAM212AQ96EL1 285 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 SLITRK1Q96PX8 696 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 ASB7Q9H672 318 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 SGK2Q9HBY8 427 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 DPP3Q9NY33 737 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 MAGEC2Q9UBF1 373 aaPredicted RBP8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 FBXO10Q9UK96 956 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 CPSF3Q9UKF6 684 aaKnown RBP8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 SLC27A6Q9Y2P4 619 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 NYNRINQ9P2P1 1898 aaKnown RBP8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 WNT7AO00755 349 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 CYP26A1O43174 497 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 SIGLEC6O43699 453 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 PRKCHP24723 683 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 CD38P28907 300 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 PCSK1P29120 753 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 PNPLA4P41247 253 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 NXPH1P58417 271 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 DAB2P98082 770 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 ZNF211Q13398 564 aaPredicted RBP8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 ZNF234Q14588 700 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 E2F5Q15329 346 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 ECM1Q16610 540 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 ISXQ2M1V0 245 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 HAUS3Q68CZ6 603 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 PTRH1Q86Y79 214 aaKnown RBP8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 ADGRF2Q8IZF7 708 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 MYLPFQ96A32 169 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 GRAMD1AQ96CP6 724 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 TMEM60Q9H2L4 133 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 ADNPQ9H2P0 1102 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 TMPRSS4Q9NRS4 437 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 ANAPC2Q9UJX6 822 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 CELSR2Q9HCU4 2923 aa8.18□□□□□ -1.1
DEPDC1B-205ENST00000512078 CRYBG3Q68DQ2 2970 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 MED13LQ71F56 2210 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 NAV3Q8IVL0 2385 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 TRIM38O00635 465 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 GABRDO14764 452 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 CPLX1O14810 134 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 HCRTO43612 131 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 GREM1O60565 184 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 HUS1O60921 280 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 EPHX1P07099 455 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 GP1BAP07359 652 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 XBP1P17861 261 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 BDNFP23560 247 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 LHX1P48742 406 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 TUBP50607 506 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 MFAP3P55082 362 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 ZBTB16Q05516 673 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 NR5A1Q13285 461 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 CAMK2GQ13555 558 aaPredicted RBP8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 GEN1Q17RS7 908 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 TDRD10Q5VZ19 366 aaKnown RBP8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 BLOC1S2Q6QNY1 142 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 TPGS1Q6ZTW0 290 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 HTR3DQ70Z44 454 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 ARL14Q8N4G2 192 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 RBBP8NLQ8NC74 664 aaPredicted RBP8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 PDZD8Q8NEN9 1154 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 OVCA2Q8WZ82 227 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 KCNN1Q92952 543 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 BICD1Q96G01 975 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 C8orf48Q96LL4 319 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.17□□□□□ -1.12e-6■■■■■ 223.6
DEPDC1B-205ENST00000512078 GJB4Q9NTQ9 266 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 KCNG1Q9UIX4 513 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 SNX14Q9Y5W7 946 aa8.17□□□□□ -1.1
DEPDC1B-205ENST00000512078 OTOGQ6ZRI0 2925 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms