RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.66□□□□□ -1.5
PROM1-211ENST00000511153 ITIH5Q86UX2 942 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 XYLT1Q86Y38 959 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 TMEM139Q8IV31 216 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 NPAS3Q8IXF0 933 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 GPR65Q8IYL9 337 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 DEFB106AQ8N104 65 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 CYP4X1Q8N118 509 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 SMRP1Q8NCR6 262 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 ZSCAN18Q8TBC5 510 aaPredicted RBP5.66□□□□□ -1.5
PROM1-211ENST00000511153 MRPS31Q92665 395 aaKnown RBP5.66□□□□□ -1.5
PROM1-211ENST00000511153 FGF13Q92913 245 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 ACSF2Q96CM8 615 aaPredicted RBP5.66□□□□□ -1.5
PROM1-211ENST00000511153 C18orf8Q96DM3 657 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 RSPRY1Q96DX4 576 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 SPATA17Q96L03 361 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 CFAP57Q96MR6 1250 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 MCEEQ96PE7 176 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 SLITRK1Q96PX8 696 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 GCNAQ96QF7 691 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 PANX2Q96RD6 677 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 SYT11Q9BT88 431 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 SELENOOQ9BVL4 669 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 SLC46A2Q9BY10 475 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 MAGEB5Q9BZ81 275 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 PLA2G2FQ9BZM2 168 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 KCNF1Q9H3M0 494 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 GOLPH3Q9H4A6 298 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 TRPM5Q9NZQ8 1165 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 CNOT8Q9UFF9 292 aaKnown RBP5.66□□□□□ -1.5
PROM1-211ENST00000511153 SCML2Q9UQR0 700 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 USTQ9Y2C2 406 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 REXO2Q9Y3B8 237 aaKnown RBP5.66□□□□□ -1.5
PROM1-211ENST00000511153 MAP4K5Q9Y4K4 846 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 PAXBP1Q9Y5B6 917 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 CPQQ9Y646 472 aa5.66□□□□□ -1.5
PROM1-211ENST00000511153 COL4A3Q01955 1670 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 GOLGA6L7A0A1B0GV03 622 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 CAPN9O14815 690 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 BUB1O43683 1085 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 TLR5O60602 858 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 RTN3O95197 1032 aaPredicted RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 LTFP02788 710 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 FYNP06241 537 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 HNRNPA1P09651 372 aaKnown RBP eCLIP5.65□□□□□ -1.5
PROM1-211ENST00000511153 HDCP19113 662 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 MMP8P22894 467 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 FLT3P36888 993 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 PRKCIP41743 596 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 SSR1P43307 286 aaKnown RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 NOP2P46087 812 aaKnown RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 SULT1E1P49888 294 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 DNA2P51530 1060 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 NAP1L1P55209 391 aaKnown RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 MRPS5P82675 430 aaKnown RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 CCZ1BP86790 482 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 CCZ1P86791 482 aaPredicted RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 ZXDBP98169 803 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 OGDHQ02218 1023 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 SMAD4Q13485 552 aaKnown RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 STILQ15468 1287 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 MEA1Q16626 185 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 ARHGAP15Q53QZ3 475 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 DCAF6Q58WW2 860 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 RAB41Q5JT25 222 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 FAM78AQ5JUQ0 283 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 HECTD3Q5T447 861 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 TRIM68Q6AZZ1 485 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 TANGO2Q6ICL3 276 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 PARM1Q6UWI2 310 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 CYP26C1Q6V0L0 522 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 TMEM184AQ6ZMB5 413 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 MON1BQ7L1V2 547 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 TAC4Q86UU9 113 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 VPS36Q86VN1 386 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 ARID3BQ8IVW6 561 aaPredicted RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 LRRC8AQ8IWT6 810 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 MCOLN2Q8IZK6 566 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 RNF139Q8WU17 664 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 RXFP2Q8WXD0 754 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 SYN2Q92777 582 aaPredicted RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 HPS1Q92902 700 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 RNF34Q969K3 372 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 ERLEC1Q96DZ1 483 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 RIPOR3Q96MK2 946 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 LRRC3BQ96PB8 259 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 NOX5Q96PH1 765 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 TBCBQ99426 244 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 NUCKS1Q9H1E3 243 aaKnown RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 LHX5Q9H2C1 402 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 FAM204AQ9H8W3 233 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 WDR6Q9NNW5 1121 aaKnown RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 OSGEPQ9NPF4 335 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 CYLDQ9NQC7 956 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 TRMT1Q9NXH9 659 aaKnown RBP5.65□□□□□ -1.5
PROM1-211ENST00000511153 CALCOCO1Q9P1Z2 691 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 CFAP97Q9P2B7 532 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 THEGQ9P2T0 379 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 IMPACTQ9P2X3 320 aa5.65□□□□□ -1.5
PROM1-211ENST00000511153 DPP7Q9UHL4 492 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms