RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 LRRC4Q9HBW1 653 aa12.63□□□□□ -0.39
CHFR-208ENST00000511001 DNAJC17Q9NVM6 304 aaKnown RBP12.63□□□□□ -0.39
CHFR-208ENST00000511001 MARCH2Q9P0N8 246 aa12.63□□□□□ -0.39
CHFR-208ENST00000511001 HESX1Q9UBX0 185 aa12.63□□□□□ -0.39
CHFR-208ENST00000511001 RWDD2AQ9UIY3 292 aa12.63□□□□□ -0.39
CHFR-208ENST00000511001 FBXO10Q9UK96 956 aa12.63□□□□□ -0.39
CHFR-208ENST00000511001 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.63□□□□□ -0.39
CHFR-208ENST00000511001 CNTN6Q9UQ52 1028 aa12.63□□□□□ -0.39
CHFR-208ENST00000511001 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.63□□□□□ -0.39
CHFR-208ENST00000511001 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.63□□□□□ -0.39
CHFR-208ENST00000511001 SLC12A8A0AV02 714 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 TBC1D3BA6NDS4 549 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 YJEFN3A6XGL0 299 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 PRRT4C9JH25 899 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 E7ENQ6 273 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 NEDD8-MDP1E9PL57 170 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 HMBSP08397 361 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 CORO1AP31146 461 aaKnown RBP12.62□□□□□ -0.39
CHFR-208ENST00000511001 RGS7P49802 495 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 DAOAP59103 153 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 COG7P83436 770 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 LMNB2Q03252 620 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 CETN1Q12798 172 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 CNGA2Q16280 664 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 CSRP2Q16527 193 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 GRAMD4Q6IC98 578 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 ANO7Q6IWH7 933 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 PMF1Q6P1K2 205 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 PRR23CQ6ZRP0 262 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 TOGARAM2Q6ZUX3 1019 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 OLIG1Q8TAK6 271 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 XPO6Q96QU8 1125 aaKnown RBP12.62□□□□□ -0.39
CHFR-208ENST00000511001 ARRDC1-AS1Q9H2J1 176 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 CNGB3Q9NQW8 809 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 WDR35Q9P2L0 1181 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 AGO1Q9UL18 857 aaKnown RBP12.62□□□□□ -0.39
CHFR-208ENST00000511001 INVSQ9Y283 1065 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 STARD13Q9Y3M8 1113 aa12.62□□□□□ -0.39
CHFR-208ENST00000511001 ZFHX4Q86UP3 3567 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 PRR5-ARHGAP8B1AHC4 643 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 FGFR1OPO95684 399 aaKnown RBP12.61□□□□□ -0.39
CHFR-208ENST00000511001 PENKP01210 267 aaPredicted RBP12.61□□□□□ -0.39
CHFR-208ENST00000511001 LCP1P13796 627 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 BCKDHBP21953 392 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 ATXN1P54253 815 aaKnown RBP12.61□□□□□ -0.39
CHFR-208ENST00000511001 ARHGAP8P85298 464 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 TRIP4Q15650 581 aaPredicted RBP12.61□□□□□ -0.39
CHFR-208ENST00000511001 CCDC6Q16204 474 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 PREPLQ4J6C6 727 aaPredicted RBP12.61□□□□□ -0.39
CHFR-208ENST00000511001 EOGTQ5NDL2 527 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 PLA2G2CQ5R387 149 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 C10orf76Q5T2E6 689 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 FYB2Q5VWT5 728 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 BSPRYQ5W0U4 402 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 EGFLAMQ63HQ2 1017 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 FAM217AQ8IXS0 508 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 CPXM2Q8N436 756 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 ZNF513Q8N8E2 541 aaPredicted RBP12.61□□□□□ -0.39
CHFR-208ENST00000511001 KCNV2Q8TDN2 545 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 BHMTQ93088 406 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 ACOX2Q99424 681 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 DCLK3Q9C098 648 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 CLSTN2Q9H4D0 955 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 CD248Q9HCU0 757 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 PLK2Q9NYY3 685 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 SFMBT1Q9UHJ3 866 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 ZNF510Q9Y2H8 683 aa12.61□□□□□ -0.39
CHFR-208ENST00000511001 M0QYV0 167 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 PIK3R2O00459 728 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 GDF9O60383 454 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 RPL34P49207 117 aaKnown RBP12.6□□□□□ -0.39
CHFR-208ENST00000511001 DGKGP49619 791 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 SF3A2Q15428 464 aaKnown RBP12.6□□□□□ -0.39
CHFR-208ENST00000511001 STILQ15468 1287 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 USP39Q53GS9 565 aaKnown RBP12.6□□□□□ -0.39
CHFR-208ENST00000511001 PMS2CLQ68D20 193 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 MSANTD2Q6P1R3 559 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 GJB7Q6PEY0 223 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 RSRC2Q7L4I2 434 aaKnown RBP12.6□□□□□ -0.39
CHFR-208ENST00000511001 DENND1CQ8IV53 801 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 FMNL3Q8IVF7 1028 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 SIX6OS1Q8N1H7 587 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 CLEC4CQ8WTT0 213 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 EDEM1Q92611 657 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 PLD4Q96BZ4 506 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 HSFY1Q96LI6 401 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 CRACR2AQ9BSW2 395 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 POLMQ9NP87 494 aaPredicted RBP12.6□□□□□ -0.39
CHFR-208ENST00000511001 UBE2TQ9NPD8 197 aaPredicted RBP12.6□□□□□ -0.39
CHFR-208ENST00000511001 OLA1Q9NTK5 396 aaKnown RBP12.6□□□□□ -0.39
CHFR-208ENST00000511001 STRIP2Q9ULQ0 834 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 CLEC4EQ9ULY5 219 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 PCDHGA5Q9Y5G8 931 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 CACNA1GO43497 2377 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 CHD8Q9HCK8 2581 aa12.6□□□□□ -0.39
CHFR-208ENST00000511001 MUC22E2RYF6 1773 aaPredicted RBP12.59□□□□□ -0.39
CHFR-208ENST00000511001 A0A1W2PQF6 199 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 BECN2A8MW95 431 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 GFRA2O00451 464 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 ALDH1A2O94788 518 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms