RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 MAP3K21Q5TCX8 1036 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 KIAA0319Q5VV43 1072 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 NCBP2-AS2Q69YL0 99 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SCYL2Q6P3W7 929 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 DARS2Q6PI48 645 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 C1orf228Q6PIY5 440 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 PPP1R21Q6ZMI0 780 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 AGMOQ6ZNB7 445 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 B4GALNT4Q76KP1 1039 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 YTHDF3Q7Z739 585 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 TADA2BQ86TJ2 420 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SCUBE3Q8IX30 993 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 ZBED8Q8IZ13 594 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SIX6OS1Q8N1H7 587 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 CCDC185Q8N715 623 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 C3orf58Q8NDZ4 430 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 MAML1Q92585 1016 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 LPPQ93052 612 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 CHMP6Q96FZ7 201 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 OLFM3Q96PB7 478 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 CSPG4P5Q96PW8 444 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 GAD1Q99259 594 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 NPY6RQ99463 290 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 CCDC77Q9BR77 488 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 TMUB1Q9BVT8 246 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 MAK16Q9BXY0 300 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 FRMD8Q9BZ67 464 aaPredicted RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 ACSS3Q9H6R3 686 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 AGO3Q9H9G7 860 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 VPS37BQ9H9H4 285 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 PRDM16Q9HAZ2 1276 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 USP29Q9HBJ7 922 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 PPANQ9NQ55 473 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 INTS9Q9NV88 658 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SENP1Q9P0U3 644 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 PSMC3IPQ9P2W1 217 aaPredicted RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SLC24A2Q9UI40 661 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 CDH9Q9ULB4 789 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 FZD10Q9ULW2 581 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 ABT1Q9ULW3 272 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 STAP1Q9ULZ2 295 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 KAT6AQ92794 2004 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 TSC2P49815 1807 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 A0A0U1RQF3 1178 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 CASTOR2A6NHX0 329 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 TMEM88BA6NKF7 163 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 HACD1B0YJ81 288 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 HHLA1C9JL84 531 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 GOLGA8MH3BSY2 632 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 M0QZQ0 153 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 MYO1CO00159 1063 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 CLDN5O00501 218 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 KCNN4O15554 427 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 PRPF4O43172 522 aaKnown RBP eCLIP4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 TLL1O43897 1013 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 MFSD11O43934 449 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 ATP2C2O75185 946 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 GCATO75600 419 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 SPAG6O75602 509 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 ZNF189O75820 626 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 AP1G2O75843 785 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 CABYRO75952 493 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 BEST1O76090 585 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 OAS1P00973 400 aaKnown RBP4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 CYP11A1P05108 521 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 ASGR1P07306 291 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 ODC1P11926 461 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 CREB1P16220 341 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 TPSB2P20231 275 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 IGFBP6P24592 240 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 RBL1P28749 1068 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 CCND3P30281 292 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 NOS2P35228 1153 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 PHBP35232 272 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 THPOP40225 353 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 MAGEA3P43357 314 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 CLCNKBP51801 687 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 AFF1P51825 1210 aaKnown RBP4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 TKTL1P51854 596 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 SLC18A1P54219 525 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 NRLP54845 237 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 CORO7P57737 925 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 DAOAP59103 153 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 YWHAZP63104 245 aaKnown RBP4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 PITX1P78337 314 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 BASP1P80723 227 aaKnown RBP4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 GBE1Q04446 702 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 SEMA3BQ13214 749 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 TUSC3Q13454 348 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 DPYSQ14117 519 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 MPP2Q14168 576 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 EFTUD2Q15029 972 aaKnown RBP eCLIP4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 TPSAB1Q15661 275 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 KCNA10Q16322 511 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 QPCTQ16769 361 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 UPP1Q16831 310 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 SKIDA1Q1XH10 827 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 KLHL38Q2WGJ6 581 aa4.94□□□□□ -1.62
PDLIM5-214ENST00000510099 BBS9Q3SYG4 887 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms