RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 GMIPQ9P107 970 aa17.42■□□□□ 0.38
SCAMP1-203ENST00000510030 RCOR3Q9P2K3 495 aaPredicted RBP17.42■□□□□ 0.38
SCAMP1-203ENST00000510030 MAGED2Q9UNF1 606 aaPredicted RBP17.42■□□□□ 0.38
SCAMP1-203ENST00000510030 CLUHO75153 1309 aa17.42■□□□□ 0.38
SCAMP1-203ENST00000510030 LRRD1A4D1F6 860 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 CCDC188H7C350 402 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 SOAT2O75908 522 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 FYNP06241 537 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 DNAJB1P25685 340 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 CDC25CP30307 473 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 CCR1P32246 355 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 GJC1P36383 396 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 TAS2R40P59535 323 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 USP46P62068 366 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 SCAPQ12770 1279 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 PPP2R5DQ14738 602 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 TFDP3Q5H9I0 405 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 SYPL2Q5VXT5 272 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 DNAJB7Q7Z6W7 309 aaPredicted RBP17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 SCD5Q86SK9 330 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 KCTD6Q8NC69 237 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 CMASQ8NFW8 434 aaPredicted RBP17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 COG1Q8WTW3 980 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 PPM1EQ8WY54 764 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 ARNTL2Q8WYA1 636 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 EDEM1Q92611 657 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 CAPZA3Q96KX2 299 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 ZNF576Q9H609 170 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 ZWILCHQ9H900 591 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 SLC12A6Q9UHW9 1150 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 TLR6Q9Y2C9 796 aa17.41■□□□□ 0.38
SCAMP1-203ENST00000510030 CHD9Q3L8U1 2897 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 SOBPA7XYQ1 873 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 IRAK2O43187 625 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 SRGAP2O75044 1071 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 ZMYND10O75800 440 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 ARHGEF15O94989 841 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 TJP3O95049 919 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 IGLV3-25P01717 112 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 RARGP13631 454 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 HMGA1P17096 107 aaKnown RBP17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 HTR7P34969 479 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 CXCR3P49682 368 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 NME3Q13232 169 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 CAMK1Q14012 370 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 KRT81Q14533 505 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 HECTD3Q5T447 861 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 GPR152Q8TDT2 470 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 NDRG1Q92597 394 aaKnown RBP17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 RNF34Q969K3 372 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 MRPL38Q96DV4 380 aaKnown RBP17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 RUNDC3BQ96NL0 473 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 ZNF670Q9BS34 389 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 NACA2Q9H009 215 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 PRDM12Q9H4Q4 367 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 WDCPQ9H6R7 721 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 MAN1C1Q9NR34 630 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 ASAH2Q9NR71 780 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 DZANK1Q9NVP4 752 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 PCSK1NQ9UHG2 260 aa17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 HBS1LQ9Y450 684 aaKnown RBP17.4■□□□□ 0.38
SCAMP1-203ENST00000510030 SPDYE4A6NLX3 237 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 TLR5O60602 858 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 CLASP2O75122 1294 aaKnown RBP17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 APOEP02649 317 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 FGGP02679 453 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 RARAP10276 462 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 PYGMP11217 842 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 ATP5C1P36542 298 aaKnown RBP17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 ARL4AP40617 200 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 MARCKSL1P49006 195 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 RING1Q06587 406 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 TFDP2Q14188 446 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 DPYSL2Q16555 572 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 LONRF2Q1L5Z9 754 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 C10orf120Q5SQS8 335 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 DCAF12L1Q5VU92 463 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 TAC4Q86UU9 113 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 ARFGAP1Q8N6T3 406 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 MRPS31Q92665 395 aaKnown RBP17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 FRMD8P1Q9BZ68 369 aaPredicted RBP17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 TLE6Q9H808 572 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 NMUR1Q9HB89 426 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 DNMT3LQ9UJW3 386 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 AP4E1Q9UPM8 1137 aa17.39■□□□□ 0.37
SCAMP1-203ENST00000510030 ZNF840PA6NDX5 716 aa17.38■□□□□ 0.37
SCAMP1-203ENST00000510030 EFCAB8A8MWE9 144 aa17.38■□□□□ 0.37
SCAMP1-203ENST00000510030 ZNF185O15231 689 aa17.38■□□□□ 0.37
SCAMP1-203ENST00000510030 ZNF189O75820 626 aaPredicted RBP17.38■□□□□ 0.37
SCAMP1-203ENST00000510030 ZFXP17010 805 aaPredicted RBP17.38■□□□□ 0.37
SCAMP1-203ENST00000510030 KDELR1P24390 212 aa17.38■□□□□ 0.37
SCAMP1-203ENST00000510030 DDX6P26196 483 aaKnown RBP eCLIP17.38■□□□□ 0.37
SCAMP1-203ENST00000510030 IL1R2P27930 398 aa17.38■□□□□ 0.37
SCAMP1-203ENST00000510030 CDH6P55285 790 aa17.38■□□□□ 0.37
SCAMP1-203ENST00000510030 COG7P83436 770 aa17.38■□□□□ 0.37
SCAMP1-203ENST00000510030 MTMR3Q13615 1198 aa17.38■□□□□ 0.37
SCAMP1-203ENST00000510030 TRIP4Q15650 581 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms