RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	CLTA	P09496	248 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	CPA1	P15085	419 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	CKMT2	P17540	419 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	ABCB4	P21439	1286 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	PAX3	P23760	479 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	ACSL1	P33121	698 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	PEX3	P56589	373 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	PPP2R3A	Q06190	1150 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	ST3GAL1	Q11201	340 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	ANO4	Q32M45	955 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	PIK3AP1	Q6ZUJ8	805 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	CACUL1	Q86Y37	369 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	BRF1	Q92994	677 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	BIRC7	Q96CA5	298 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	SIPA1	Q96FS4	1042 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	ELF4	Q99607	663 aa	Predicted RBP	10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	PKMYT1	Q99640	499 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	NAP1L4	Q99733	375 aa	Known RBP	10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	TUFT1	Q9NNX1	390 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	THSD1	Q9NS62	852 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	DNAJC17	Q9NVM6	304 aa	Known RBP	10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	STON1	Q9Y6Q2	735 aa		10.21	□□□□□ -0.77
PTPN20-223	ENST00000509900	ZNF840P	A6NDX5	716 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	OAS1	P00973	400 aa	Known RBP	10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	ACP1	P24666	158 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	TXK	P42681	527 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	CCT2	P78371	535 aa	Known RBP	10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	TSPY1	Q01534	308 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	MCL1	Q07820	350 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	PDIA5	Q14554	519 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	STARD3	Q14849	445 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	ENOX2	Q16206	610 aa	Known RBP	10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	CALCRL	Q16602	461 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	CDCP2	Q5VXM1	449 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	JADE1	Q6IE81	842 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900		Q6ZUG5	572 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	ADAT2	Q7Z6V5	191 aa	Known RBP	10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	SCN4B	Q8IWT1	228 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	BBS7	Q8IWZ6	715 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	DAW1	Q8N136	415 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	LRRN4	Q8WUT4	740 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	SCFD1	Q8WVM8	642 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	PRCC	Q92733	491 aa	Predicted RBP	10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	OTUB2	Q96DC9	234 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	TRIM9	Q9C026	710 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	RWDD1	Q9H446	243 aa	Predicted RBP	10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	SPHK2	Q9NRA0	654 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	TRPM5	Q9NZQ8	1165 aa		10.2	□□□□□ -0.78
PTPN20-223	ENST00000509900	CSMD1	Q96PZ7	3565 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900		A0A1W2PNU3	283 aa	Predicted RBP	10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	VILL	O15195	856 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	CACNG3	O60359	315 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	TSPAN3	O60637	253 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	ITGB2	P05107	769 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	ADRB2	P07550	413 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	ELAVL4	P26378	380 aa	Known RBP	10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	CD27	P26842	260 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	EPHA8	P29322	1005 aa	Predicted RBP	10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	AFM	P43652	599 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	COPA	P53621	1224 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	E2F1	Q01094	437 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	PTS	Q03393	145 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	CLN3	Q13286	438 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	ZSCAN23	Q3MJ62	389 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	SFMBT2	Q5VUG0	894 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	IGF2-AS	Q6U949	168 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	KANSL1	Q7Z3B3	1105 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	TRIM22	Q8IYM9	498 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	FAM177A1	Q8N128	213 aa	Predicted RBP	10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	WBP2	Q969T9	261 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	CCSER1	Q9C0I3	900 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	ZNF768	Q9H5H4	540 aa	Known RBP	10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	KMT5A	Q9NQR1	393 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	LRWD1	Q9UFC0	647 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	FKBPL	Q9UIM3	349 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	GTF3C4	Q9UKN8	822 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	NF1	P21359	2839 aa		10.19	□□□□□ -0.78
PTPN20-223	ENST00000509900	RP1L1	Q8IWN7	2480 aa	Predicted RBP	10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	RP1	P56715	2156 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	FBN3	Q75N90	2809 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	CLDN3	O15551	220 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	FAM189A1	O60320	539 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	DEXI	O95424	95 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	WNT1	P04628	370 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	MBL2	P11226	248 aa	Predicted RBP	10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	SFTPC	P11686	197 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	ACAT1	P24752	427 aa	Known RBP	10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	C21orf59	P57076	290 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	GRIN1	Q05586	938 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	SSRP1	Q08945	709 aa	Known RBP	10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	BNIP3	Q12983	259 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	ENPP2	Q13822	863 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	SKIDA1	Q1XH10	827 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	KRTAP21-3	Q3LHN1	58 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	TSGA10IP	Q3SY00	556 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	CFAP221	Q4G0U5	840 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	INTS6L	Q5JSJ4	861 aa	Known RBP	10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	RNF20	Q5VTR2	975 aa		10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	DDX42	Q86XP3	938 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
PTPN20-223	ENST00000509900	CCNL2	Q96S94	520 aa	Predicted RBP	10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms